RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 GNAQP50148 359 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 STAT2P52630 851 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 ANTXR2P58335 489 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 EXOSC10Q01780 885 aaKnown RBP7.15□□□□□ -1.26
SF3B1-209ENST00000479532 RABEP1Q15276 862 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 SEC23AQ15436 765 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 NFKBIBQ15653 356 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
SF3B1-209ENST00000479532 ASPRV1Q53RT3 343 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 TAF3Q5VWG9 929 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 SIAH1Q8IUQ4 282 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 SPICE1Q8N0Z3 855 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 CTCFLQ8NI51 663 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-209ENST00000479532 IGDCC4Q8TDY8 1250 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 NUP133Q8WUM0 1156 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 CHMP4CQ96CF2 233 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 LRRC2Q9BYS8 371 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 CHRDQ9H2X0 955 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 LY9Q9HBG7 655 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 SAGE1Q9NXZ1 904 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 ABI2Q9NYB9 513 aaPredicted RBP7.15□□□□□ -1.26
SF3B1-209ENST00000479532 HOXC10Q9NYD6 342 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 CNTN3Q9P232 1028 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 MYPNQ86TC9 1320 aa7.15□□□□□ -1.26
SF3B1-209ENST00000479532 CCDC196A0A1B0GTZ2 297 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 TMEM232C9JQI7 657 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 IGF2BP3O00425 579 aaKnown RBP eCLIP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 ZBTB43O43298 467 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 DHX16O60231 1041 aaKnown RBP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 SASH3O75995 380 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 PDHBP11177 359 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 GCLCP48506 637 aaPredicted RBP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 NEK4P51957 841 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 RCAN1P53805 252 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 COG2Q14746 738 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 PPP2R5BQ15173 497 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 FAM83BQ5T0W9 1011 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 TREML2Q5T2D2 321 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 CATSPERGQ6ZRH7 1159 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 KRT25Q7Z3Z0 450 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 SGMS1Q86VZ5 419 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 CCAR1Q8IX12 1150 aaKnown RBP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 ZNF654Q8IZM8 581 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 FBXL16Q8N461 479 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 MB21D1Q8N884 522 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 C1orf127Q8N9H9 656 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 EPS8L3Q8TE67 593 aaKnown RBP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 BRF1Q92994 677 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 IL17RAQ96F46 866 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 TCEANC2Q96MN5 208 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 TBC1D32Q96NH3 1257 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 MAP3K14Q99558 947 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 MDFIQ99750 246 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 SLF1Q9BQI6 1058 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 LZTS2Q9BRK4 669 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 SSBP4Q9BWG4 385 aaPredicted RBP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 UPF3BQ9BZI7 483 aaKnown RBP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 CWC22Q9HCG8 908 aaKnown RBP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 C11orf16Q9NQ32 467 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 RBM28Q9NW13 759 aaKnown RBP7.14□□□□□ -1.27
SF3B1-209ENST00000479532 PNMA2Q9UL42 364 aa7.14□□□□□ -1.27
SF3B1-209ENST00000479532 FRMPD2Q68DX3 1309 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 KLF18A0A0U1RQI7 1052 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 GOLGA8AA7E2F4 631 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 GOLGA8BA8MQT2 603 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 EREGO14944 169 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 PLA2G6O60733 806 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 ZBED4O75132 1171 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 TRPA1O75762 1119 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 CPA1P15085 419 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 ADH7P40394 386 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 MCM2P49736 904 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 METAP2P50579 478 aaKnown RBP eCLIP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 HERVK_113P62684 666 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 CCNA1P78396 465 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 ZNF543Q08ER8 600 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 TRAF1Q13077 416 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 MOGSQ13724 837 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 CCINQ13939 588 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 KIF22Q14807 665 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 GRM4Q14833 912 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 ARHGEF6Q15052 776 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 TTC39BQ5VTQ0 682 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 CPLX2Q6PUV4 134 aaKnown RBP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 KCTD1Q719H9 257 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 MICU3Q86XE3 530 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 DNAJC5GQ8N7S2 189 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 PRPF38AQ8NAV1 312 aaKnown RBP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 TMEM87AQ8NBN3 555 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 FRMD6Q96NE9 622 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 NUP88Q99567 741 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 PTPN18Q99952 460 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 GSX2Q9BZM3 304 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 ASCC2Q9H1I8 757 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 ALDH8A1Q9H2A2 487 aaPredicted RBP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 NPHS2Q9NP85 383 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 RNF186Q9NXI6 227 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 PPP1R9AQ9ULJ8 1098 aa7.13□□□□□ -1.27
SF3B1-209ENST00000479532 OAS3Q9Y6K5 1087 aaKnown RBP7.13□□□□□ -1.27
SF3B1-209ENST00000479532 AK5Q9Y6K8 562 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 225.6 ms