RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 TTC28Q96AY4 2481 aa19.78■□□□□ 0.76
ECHDC1-216ENST00000479525 MYO7AQ13402 2215 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 DHX15O43143 795 aaKnown RBP19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 EDIL3O43854 480 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 EPC2Q52LR7 807 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 PRR16Q569H4 304 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 SWSAP1Q6NVH7 229 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 ABHD15Q6UXT9 468 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 RUFY3Q7L099 469 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 RSPH3Q86UC2 560 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 SP7Q8TDD2 431 aaPredicted RBP19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 CRYGNQ8WXF5 182 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 ZNF577Q9BSK1 485 aa19.77■□□□□ 0.76
ECHDC1-216ENST00000479525 TNFRSF10AO00220 468 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 IPO5O00410 1097 aaKnown RBP19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 ATG7O95352 703 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 ATP4AP20648 1035 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 PSMA5P28066 241 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 PDXDC2PQ6P474 469 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 APBB2Q92870 758 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 CDHR5Q9HBB8 845 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 ZNF302Q9NR11 478 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 TRPV2Q9Y5S1 764 aa19.76■□□□□ 0.75
ECHDC1-216ENST00000479525 ESYT2A0FGR8 921 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 RRN3P2A6NIE6 340 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 ENPP3O14638 875 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 NEFLP07196 543 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 BMP1P13497 986 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 GATMP50440 423 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 MTHFD1LQ6UB35 978 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 PLPPR4Q7Z2D5 763 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 RTN4RL1Q86UN2 441 aaPredicted RBP19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 ZSWIM6Q9HCJ5 1215 aa19.75■□□□□ 0.75
ECHDC1-216ENST00000479525 PLXNA4Q9HCM2 1894 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 IGKV6D-21A0A0A0MT36 114 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 CHMP2AO43633 222 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 CYP3A4P08684 503 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 IFNAR1P17181 557 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 KLRC1P26715 233 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 PAN2Q504Q3 1202 aaKnown RBP19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 TSHZ1Q6ZSZ6 1077 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 RPAINQ86UA6 219 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 TMEM192Q8IY95 271 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 CKAP2LQ8IYA6 745 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 ZNF668Q96K58 619 aaPredicted RBP19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 RNF26Q9BY78 433 aaPredicted RBP19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 GLT8D2Q9H1C3 349 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 CYP46A1Q9Y6A2 500 aa19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 FNDC1Q4ZHG4 1894 aaPredicted RBP19.74■□□□□ 0.75
ECHDC1-216ENST00000479525 CTNNB1P35222 781 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 NLRP5P59047 1200 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 GPM6BQ13491 265 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 FAM160B1Q5W0V3 765 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 NIPA1Q7RTP0 329 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 CCDC12Q8WUD4 166 aaPredicted RBP19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 HLA-CQ95604 372 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 LENG9Q96B70 501 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 GABBR1Q9UBS5 961 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 PADI3Q9ULW8 664 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 PCDHA2Q9Y5H9 948 aa19.73■□□□□ 0.75
ECHDC1-216ENST00000479525 ZBTB42B2RXF5 422 aa19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 GNA11P29992 359 aa19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 SSRP1Q08945 709 aaKnown RBP19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 MIS18BP1Q6P0N0 1132 aa19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 ATP8B4Q8TF62 1192 aa19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 TMEM40Q8WWA1 233 aa19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 IL17RAQ96F46 866 aa19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 CELF4Q9BZC1 486 aaKnown RBP19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 SAMM50Q9Y512 469 aa19.72■□□□□ 0.75
ECHDC1-216ENST00000479525 M0QZ92 97 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 MGEA5O60502 916 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 VTNP04004 478 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 NFX1Q12986 1120 aaKnown RBP19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 IER5Q5VY09 327 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 EP400NLQ6ZTU2 488 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 FBXL16Q8N461 479 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 FIBCD1Q8N539 461 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 CCDC148Q8NFR7 591 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 TMX1Q9H3N1 280 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 GJB4Q9NTQ9 266 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 PDRG1Q9NUG6 133 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 TCEAL9Q9UHQ7 104 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 ADGRA3Q8IWK6 1321 aa19.71■□□□□ 0.75
ECHDC1-216ENST00000479525 SMIM35A0A1B0GVV1 85 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 MSH4O15457 936 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 HBP1O60381 514 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 TDP2O95551 362 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 LINC00271P0C7V0 271 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 CLCN3P51790 818 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 KRT76Q01546 638 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 PAK2Q13177 524 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 UGCGQ16739 394 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 TBCKQ8TEA7 893 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 RAPGEFL1Q9UHV5 662 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 KCNJ14Q9UNX9 436 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 NOC2LQ9Y3T9 749 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 IGSF9BQ9UPX0 1349 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 H3BNC9 293 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 CPLX1O14810 134 aa19.7■□□□□ 0.74
ECHDC1-216ENST00000479525 KCNA5P22460 613 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms