RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 KRT9P35527 623 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 USP11P51784 963 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 CLNS1AP54105 237 aaKnown RBP6.76□□□□□ -1.33
RC3H1-204ENST00000479099 ICA1Q05084 483 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 PCDH1Q08174 1060 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 MTA1Q13330 715 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 BLMHQ13867 455 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 LLGL1Q15334 1064 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
RC3H1-204ENST00000479099 KIAA0753Q2KHM9 967 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 TTC31Q49AM3 519 aaPredicted RBP6.76□□□□□ -1.33
RC3H1-204ENST00000479099 CCDC38Q502W7 563 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 HECTD3Q5T447 861 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 OVOS1Q6IE37 1185 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 DSTYKQ6XUX3 929 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 NLRC3Q7RTR2 1065 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 NXPE1Q8N323 547 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 PCYOX1LQ8NBM8 494 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 ZSCAN18Q8TBC5 510 aaPredicted RBP6.76□□□□□ -1.33
RC3H1-204ENST00000479099 ZFPM2Q8WW38 1151 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 IPCEF1Q8WWN9 437 aaPredicted RBP6.76□□□□□ -1.33
RC3H1-204ENST00000479099 DIO2Q92813 273 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 SLC9A7Q96T83 725 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 MAP3K14Q99558 947 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 TREX2Q9BQ50 279 aaPredicted RBP6.76□□□□□ -1.33
RC3H1-204ENST00000479099 TMEM60Q9H2L4 133 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 CLEC4MQ9H2X3 399 aaPredicted RBP6.76□□□□□ -1.33
RC3H1-204ENST00000479099 UBN1Q9NPG3 1134 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 DISC1Q9NRI5 854 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 ATP8A2Q9NTI2 1148 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 ARGLU1Q9NWB6 273 aaPredicted RBP6.76□□□□□ -1.33
RC3H1-204ENST00000479099 C14orf119Q9NWQ9 140 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 NSMCE4AQ9NXX6 385 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 SEL1LQ9UBV2 794 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 STAP2Q9UGK3 403 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 CDC23Q9UJX2 597 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 PPP1R9AQ9ULJ8 1098 aa6.76□□□□□ -1.33
RC3H1-204ENST00000479099 GPRASP1Q5JY77 1395 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 FAM95CA0A1B0GW59 222 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 ANKRD34BA5PLL1 514 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 TRIM64A6NGJ6 449 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 TRIM64BA6NI03 449 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 MASP2O00187 686 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 CBX4O00257 560 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 XPOTO43592 962 aaKnown RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 SLITRK5O94991 958 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 F13BP05160 661 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 ITGAVP06756 1048 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 DHRS4L1P0CG22 281 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 DRD2P14416 443 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 KIF5BP33176 963 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 STAT1P42224 750 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 GRIA2P42262 883 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 ATXN1P54253 815 aaKnown RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 SESN3P58005 492 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 SOX4Q06945 474 aaPredicted RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 LRRC14Q15048 493 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 NFKBIBQ15653 356 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 SPRED3Q2MJR0 410 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 HP1BP3Q5SSJ5 553 aaPredicted RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 FKBP15Q5T1M5 1219 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 SCARA3Q6AZY7 606 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 DARS2Q6PI48 645 aaKnown RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 PAOXQ6QHF9 649 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 ZNF227Q86WZ6 799 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 ERC1Q8IUD2 1116 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 C2CD4AQ8NCU7 369 aaPredicted RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 GRIN3AQ8TCU5 1115 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 DIS3LQ8TF46 1054 aaKnown RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 SMARCC1Q92922 1105 aaPredicted RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 PTPRN2Q92932 1015 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 HPS3Q969F9 1004 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 KIAA1191Q96A73 305 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 IWS1Q96ST2 819 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 PPP1R16BQ96T49 567 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 YIPF2Q9BWQ6 316 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 TRIT1Q9H3H1 467 aaKnown RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 ZNF576Q9H609 170 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 IFT80Q9P2H3 777 aaPredicted RBP6.75□□□□□ -1.33
RC3H1-204ENST00000479099 LRP2BPQ9P2M1 347 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 EPS15L1Q9UBC2 864 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 SUSD2Q9UGT4 822 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 INVSQ9Y283 1065 aa6.75□□□□□ -1.33
RC3H1-204ENST00000479099 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.74□□□□□ -1.33
RC3H1-204ENST00000479099 EIF3FO00303 357 aaPredicted RBP6.74□□□□□ -1.33
RC3H1-204ENST00000479099 CPLX1O14810 134 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 TUSC2O75896 110 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 TPM2P07951 284 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 ABCB4P21439 1286 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 NME2P22392 152 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 HOXA10P31260 410 aaPredicted RBP6.74□□□□□ -1.33
RC3H1-204ENST00000479099 DEKP35659 375 aaKnown RBP6.74□□□□□ -1.33
RC3H1-204ENST00000479099 PRIM2P49643 509 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 ZNF132P52740 706 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 NAP1L1P55209 391 aaKnown RBP6.74□□□□□ -1.33
RC3H1-204ENST00000479099 MLECQ14165 292 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 LRRC32Q14392 662 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
RC3H1-204ENST00000479099 CCDC30Q5VVM6 783 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms