RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 FAM228BP0C875 321 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 PRLRP16471 622 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 SF3A3Q12874 501 aaKnown RBP eCLIP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 UBE2SQ16763 222 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 GALNT17Q6IS24 598 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 LRRC55Q6ZSA7 311 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 CASKIN2Q8WXE0 1202 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 ARHGEF1Q92888 912 aaKnown RBP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 MKL1Q969V6 931 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 RBM41Q96IZ5 413 aaKnown RBP12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 TSG101Q99816 390 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 GORASP1Q9BQQ3 440 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 YIPF2Q9BWQ6 316 aa12.06□□□□□ -0.48
LRRFIP1-211ENST00000478958 NPHP3-ACAD11A0A0J9YXS1 232 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 GOLGA6L10A6NI86 522 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 RAD51CO43502 376 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 RAD21O60216 631 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 ATP6V1G2O95670 118 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 NR1D1P20393 614 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 LSP1P33241 339 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 EPS15P42566 896 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 SCNN1BP51168 640 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 ECM1Q16610 540 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 KRT79Q5XKE5 535 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 GUF1Q8N442 669 aaKnown RBP12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 CUL5Q93034 780 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 AP1M1Q9BXS5 423 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 ANP32DO95626 131 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 PAK2Q13177 524 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 TMEM266Q2M3C6 531 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 MTHFD1LQ6UB35 978 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 MYOCDQ8IZQ8 938 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 GPCPD1Q9NPB8 672 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 GGA2Q9UJY4 613 aa12.05□□□□□ -0.48
LRRFIP1-211ENST00000478958 E7EVH7 732 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 MGRN1O60291 552 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 FGFR1OPO95684 399 aaKnown RBP12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ACTN1P12814 892 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 HDLBPQ00341 1268 aaKnown RBP12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ITIH3Q06033 890 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 KLHL30Q0D2K2 578 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 CUL3Q13618 768 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ASTE1Q2TB18 679 aaPredicted RBP12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 PLAAQ9Y263 795 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 COL4A3BPQ9Y5P4 624 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ITGB4P16144 1822 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ANKRD36CQ5JPF3 1778 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 LIN7AO14910 233 aaPredicted RBP12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 NOL4O94818 638 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 PPP1R2P41236 205 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 CDK8P49336 464 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 IQCKQ8N0W5 287 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 CAVIN3Q969G5 261 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 CCT8L2Q96SF2 557 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 IQCGQ9H095 443 aaKnown RBP12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 CEP104O60308 925 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ATP2C2O75185 946 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 LCA5LO95447 670 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 BAG3O95817 575 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 LRRC63Q05C16 580 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ODF2Q5BJF6 829 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 ZNF572Q7Z3I7 529 aaPredicted RBP12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 NLRP14Q86W24 1093 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 MARCH10Q8NA82 808 aaPredicted RBP12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 RAD54LQ92698 747 aa12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
LRRFIP1-211ENST00000478958 E9PMD0 336 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 ATP4AP20648 1035 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 CTCFP49711 727 aaPredicted RBP12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 FKBP3Q00688 224 aaKnown RBP12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 COASYQ13057 564 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 HERC4Q5GLZ8 1057 aaPredicted RBP12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 FAM26FQ5R3K3 315 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 SDCCAG8Q86SQ7 713 aaPredicted RBP12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 TAF4BQ92750 862 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 LZTS2Q9BRK4 669 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 GDF3Q9NR23 364 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 A0A1B0GVG6 124 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 PVALEFA0A1B0GWK0 134 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 DNM1LO00429 736 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 PJA2O43164 708 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 SERPING1P05155 500 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 EPB41P11171 864 aaKnown RBP12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 PAX3P23760 479 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 BLMHQ13867 455 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 SPTY2D1Q68D10 685 aaPredicted RBP12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 GALNT15Q8N3T1 639 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 PANK4Q9NVE7 773 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
LRRFIP1-211ENST00000478958 SSU72P8A0A1W2PR75 194 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 ATP6V1G1O75348 118 aa12.02□□□□□ -0.48
LRRFIP1-211ENST00000478958 PPP1R37O75864 691 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms