RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SLC9A5Q14940 896 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 EMC4Q5J8M3 183 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 TSPAN17Q96FV3 270 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 SLC6A20Q9NP91 592 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 PALD1Q9ULE6 856 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 COQ6Q9Y2Z9 468 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 HCFC2Q9Y5Z7 792 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 MROH1Q8NDA8 1641 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 EFCAB6Q5THR3 1501 aa7.11□□□□□ -1.27
CCDC171-207ENST00000478913 NUP188Q5SRE5 1749 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 LOC105371045A0A1W2PR82 267 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 PEX10O60683 326 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 COL6A2P12110 1019 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 TMEM132EQ6IEE7 984 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 CNNM4Q6P4Q7 775 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 C16orf59Q7L2K0 433 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 MILR1Q7Z6M3 343 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 DDX53Q86TM3 631 aaKnown RBP7.1□□□□□ -1.27
CCDC171-207ENST00000478913 FBXO15Q8NCQ5 510 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-207ENST00000478913 ALG3Q92685 438 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 SIRT5Q9NXA8 310 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 ZNF652Q9Y2D9 606 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 PCDHB4Q9Y5E5 795 aa7.1□□□□□ -1.27
CCDC171-207ENST00000478913 ADGRB2O60241 1585 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 NPTXRO95502 500 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 JMJD7P0C870 316 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 SOX10P56693 466 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 ZNF200P98182 395 aaPredicted RBP7.09□□□□□ -1.27
CCDC171-207ENST00000478913 CRY1Q16526 586 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 TM4SF20Q53R12 229 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 OGFOD2Q6N063 350 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 CYP4F22Q6NT55 531 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 ZCCHC8Q6NZY4 707 aaKnown RBP7.09□□□□□ -1.27
CCDC171-207ENST00000478913 LRRTM3Q86VH5 581 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 CISD2Q8N5K1 135 aaKnown RBP7.09□□□□□ -1.27
CCDC171-207ENST00000478913 IGSF22Q8N9C0 903 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 CELF4Q9BZC1 486 aaKnown RBP7.09□□□□□ -1.27
CCDC171-207ENST00000478913 KCNK12Q9HB15 430 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 MYOTQ9UBF9 498 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 CBLCQ9ULV8 474 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 NUB1Q9Y5A7 615 aa7.09□□□□□ -1.27
CCDC171-207ENST00000478913 TNS1Q9HBL0 1735 aaKnown RBP7.09□□□□□ -1.27
CCDC171-207ENST00000478913 SPAG9O60271 1321 aaKnown RBP7.08□□□□□ -1.28
CCDC171-207ENST00000478913 MYOCOSA0A1B0GUC4 107 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 NKRFO15226 690 aaKnown RBP eCLIP7.08□□□□□ -1.28
CCDC171-207ENST00000478913 CKMP06732 381 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 HSPA8P11142 646 aaKnown RBP7.08□□□□□ -1.28
CCDC171-207ENST00000478913 GPR19Q15760 415 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 ABHD17CQ6PCB6 329 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 UBE2R2Q712K3 238 aaPredicted RBP7.08□□□□□ -1.28
CCDC171-207ENST00000478913 UHMK1Q8TAS1 419 aaKnown RBP7.08□□□□□ -1.28
CCDC171-207ENST00000478913 PHOSPHO1Q8TCT1 267 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 MCOLN1Q9GZU1 580 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 SMOC1Q9H4F8 434 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 BCAS3Q9H6U6 928 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 SAMD15Q9P1V8 674 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 RAPGEFL1Q9UHV5 662 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 DSEQ9UL01 958 aa7.08□□□□□ -1.28
CCDC171-207ENST00000478913 SLIT2O94813 1529 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 TEX51A0A1B0GUA7 166 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 SLC27A2O14975 620 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 TADA3O75528 432 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 MYCLP1P12525 358 aaPredicted RBP7.07□□□□□ -1.28
CCDC171-207ENST00000478913 PDE6AP16499 860 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 KRT15P19012 456 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 NEK4P51957 841 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 CFAP100Q494V2 611 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 TMEM177Q53S58 311 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 PIK3R6Q5UE93 754 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 ARHGAP36Q6ZRI8 547 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 EP400NLQ6ZTU2 488 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 NCOA3Q9Y6Q9 1424 aa7.07□□□□□ -1.28
CCDC171-207ENST00000478913 ARHGAP5Q13017 1502 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 CASZ1Q86V15 1759 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 KIDINS220Q9ULH0 1771 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 TCRBV5S2A0A599 114 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 M0R2C6 588 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 KPNA6O60684 536 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 SEMA7AO75326 666 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 GLRX3O76003 335 aaKnown RBP7.06□□□□□ -1.28
CCDC171-207ENST00000478913 C8AP07357 584 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 OSTM1Q86WC4 334 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 AMIGO3Q86WK7 504 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 TRIM48Q8IWZ4 208 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 PPM1KQ8N3J5 372 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 WNK4Q96J92 1243 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 YIPF4Q9BSR8 244 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 TARS2Q9BW92 718 aaKnown RBP7.06□□□□□ -1.28
CCDC171-207ENST00000478913 STK32BQ9NY57 414 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 ASH2LQ9UBL3 628 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 MBD1Q9UIS9 605 aaPredicted RBP7.06□□□□□ -1.28
CCDC171-207ENST00000478913 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.06□□□□□ -1.28
CCDC171-207ENST00000478913 PRKAB1Q9Y478 270 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 SAMD9LQ8IVG5 1584 aa7.06□□□□□ -1.28
CCDC171-207ENST00000478913 NUP153P49790 1475 aaKnown RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.05□□□□□ -1.28
CCDC171-207ENST00000478913 TCRBV5S4A2TA0A5A2 114 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 ZNF561-AS1K7EIQ3 104 aa7.05□□□□□ -1.28
CCDC171-207ENST00000478913 PDE8AO60658 829 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms