RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 RUFY3Q7L099 469 aa25.95■■□□□ 1.74
C9orf3-216ENST00000478603 CCDC60Q8IWA6 550 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-216ENST00000478603 TNPO1Q92973 898 aaKnown RBP25.95■■□□□ 1.74
C9orf3-216ENST00000478603 RNF26Q9BY78 433 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-216ENST00000478603 AGO3Q9H9G7 860 aaKnown RBP25.95■■□□□ 1.74
C9orf3-216ENST00000478603 VPS54Q9P1Q0 977 aa25.95■■□□□ 1.74
C9orf3-216ENST00000478603 COG5Q9UP83 839 aa25.95■■□□□ 1.74
C9orf3-216ENST00000478603 PCDHA2Q9Y5H9 948 aa25.95■■□□□ 1.74
C9orf3-216ENST00000478603 MUC3AQ02505 3323 aa25.95■■□□□ 1.74
C9orf3-216ENST00000478603 TTC3P53804 2025 aa25.95■■□□□ 1.74
C9orf3-216ENST00000478603 WDR81Q562E7 1941 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 RALGAPA2Q2PPJ7 1873 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 IFNAR1P17181 557 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 GNA11P29992 359 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 CD52P31358 61 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 EVCP57679 992 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 AAK1Q2M2I8 961 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 EPC2Q52LR7 807 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 IER5Q5VY09 327 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 TSHZ1Q6ZSZ6 1077 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 HLA-CQ95604 372 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 LARP6Q9BRS8 491 aaKnown RBP25.94■■□□□ 1.74
C9orf3-216ENST00000478603 ZNF577Q9BSK1 485 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 ZSWIM6Q9HCJ5 1215 aa25.94■■□□□ 1.74
C9orf3-216ENST00000478603 COL4A6Q14031 1691 aa25.93■■□□□ 1.74
C9orf3-216ENST00000478603 ENPP3O14638 875 aa25.93■■□□□ 1.74
C9orf3-216ENST00000478603 FAM160B1Q5W0V3 765 aa25.93■■□□□ 1.74
C9orf3-216ENST00000478603 MCTP2Q6DN12 878 aa25.93■■□□□ 1.74
C9orf3-216ENST00000478603 MTHFD1LQ6UB35 978 aa25.93■■□□□ 1.74
C9orf3-216ENST00000478603 ZNF302Q9NR11 478 aa25.93■■□□□ 1.74
C9orf3-216ENST00000478603 TRPV2Q9Y5S1 764 aa25.93■■□□□ 1.74
C9orf3-216ENST00000478603 SLC26A2P50443 739 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 PRR16Q569H4 304 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 SWSAP1Q6NVH7 229 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 MIS18BP1Q6P0N0 1132 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 PDXDC2PQ6P474 469 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 TMEM192Q8IY95 271 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 CCDC148Q8NFR7 591 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 ATP8B4Q8TF62 1192 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 LINC01599Q8WXQ3 324 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 IL17RAQ96F46 866 aa25.92■■□□□ 1.74
C9orf3-216ENST00000478603 M0QZ92 97 aa25.91■■□□□ 1.74
C9orf3-216ENST00000478603 HBP1O60381 514 aa25.91■■□□□ 1.74
C9orf3-216ENST00000478603 RPLP2P05387 115 aaKnown RBP25.91■■□□□ 1.74
C9orf3-216ENST00000478603 KLRC1P26715 233 aa25.91■■□□□ 1.74
C9orf3-216ENST00000478603 SETQ01105 290 aaPredicted RBP25.91■■□□□ 1.74
C9orf3-216ENST00000478603 SAMD11Q96NU1 681 aa25.91■■□□□ 1.74
C9orf3-216ENST00000478603 UPF3BQ9BZI7 483 aaKnown RBP25.91■■□□□ 1.74
C9orf3-216ENST00000478603 CYP46A1Q9Y6A2 500 aa25.91■■□□□ 1.74
C9orf3-216ENST00000478603 SMIM35A0A1B0GVV1 85 aa25.9■■□□□ 1.74
C9orf3-216ENST00000478603 EPB41L2O43491 1005 aaKnown RBP25.9■■□□□ 1.74
C9orf3-216ENST00000478603 NEFLP07196 543 aa25.9■■□□□ 1.74
C9orf3-216ENST00000478603 ATP4AP20648 1035 aa25.9■■□□□ 1.74
C9orf3-216ENST00000478603 GPM6BQ13491 265 aa25.9■■□□□ 1.74
C9orf3-216ENST00000478603 TRMT1LQ7Z2T5 733 aaKnown RBP25.9■■□□□ 1.74
C9orf3-216ENST00000478603 BICD2Q8TD16 824 aa25.9■■□□□ 1.74
C9orf3-216ENST00000478603 CELF4Q9BZC1 486 aaKnown RBP25.9■■□□□ 1.74
C9orf3-216ENST00000478603 TBC1D22BQ9NU19 505 aa25.9■■□□□ 1.74
C9orf3-216ENST00000478603 MYO7AQ13402 2215 aa25.9■■□□□ 1.74
C9orf3-216ENST00000478603 EDIL3O43854 480 aa25.89■■□□□ 1.74
C9orf3-216ENST00000478603 CIITAP33076 1130 aa25.89■■□□□ 1.74
C9orf3-216ENST00000478603 RTN4RL1Q86UN2 441 aaPredicted RBP25.89■■□□□ 1.74
C9orf3-216ENST00000478603 FIBCD1Q8N539 461 aa25.89■■□□□ 1.74
C9orf3-216ENST00000478603 LENG9Q96B70 501 aa25.89■■□□□ 1.74
C9orf3-216ENST00000478603 PADI3Q9ULW8 664 aa25.89■■□□□ 1.74
C9orf3-216ENST00000478603 IGSF9BQ9UPX0 1349 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 ATG2AQ2TAZ0 1938 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 ZBTB42B2RXF5 422 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 H3BNC9 293 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 NLRP5P59047 1200 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 KRT76Q01546 638 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 STK3Q13188 491 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 ZNF746Q6NUN9 644 aaPredicted RBP25.88■■□□□ 1.73
C9orf3-216ENST00000478603 CKAP2LQ8IYA6 745 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 MRPL38Q96DV4 380 aaKnown RBP25.88■■□□□ 1.73
C9orf3-216ENST00000478603 RC3H2Q9HBD1 1191 aaKnown RBP25.88■■□□□ 1.73
C9orf3-216ENST00000478603 GINS2Q9Y248 185 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 SQORQ9Y6N5 450 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 ADGRA3Q8IWK6 1321 aa25.88■■□□□ 1.73
C9orf3-216ENST00000478603 COL1A2P08123 1366 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 CTNNB1P35222 781 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 SSRP1Q08945 709 aaKnown RBP25.87■■□□□ 1.73
C9orf3-216ENST00000478603 PAK2Q13177 524 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 TMEM266Q2M3C6 531 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 ZNF484Q5JVG2 852 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 TRIM22Q8IYM9 498 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 NME8Q8N427 588 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 TM6SF1Q9BZW5 370 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 CDHR5Q9HBB8 845 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 SH3GLB2Q9NR46 395 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 MAFBQ9Y5Q3 323 aaPredicted RBP25.87■■□□□ 1.73
C9orf3-216ENST00000478603 KDM3AQ9Y4C1 1321 aa25.87■■□□□ 1.73
C9orf3-216ENST00000478603 LINC00271P0C7V0 271 aa25.86■■□□□ 1.73
C9orf3-216ENST00000478603 PTPROQ16827 1216 aa25.86■■□□□ 1.73
C9orf3-216ENST00000478603 KIAA0319LQ8IZA0 1049 aa25.86■■□□□ 1.73
C9orf3-216ENST00000478603 ZNF274Q96GC6 653 aaPredicted RBP25.86■■□□□ 1.73
C9orf3-216ENST00000478603 PPP1R16BQ96T49 567 aa25.86■■□□□ 1.73
C9orf3-216ENST00000478603 UBE2ZQ9H832 354 aaPredicted RBP25.86■■□□□ 1.73
C9orf3-216ENST00000478603 GABBR1Q9UBS5 961 aa25.86■■□□□ 1.73
C9orf3-216ENST00000478603 TCEAL9Q9UHQ7 104 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms