RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 PDS5AQ29RF7 1337 aaKnown RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 N4BP1O75113 896 aaKnown RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 CCNE1P24864 410 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 KIF11P52732 1056 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 PSMC6P62333 389 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 HERVK_113P62684 666 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 PABPC4Q13310 644 aaKnown RBP eCLIP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 TMEM266Q2M3C6 531 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 GRAMD1BQ3KR37 738 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 HERC4Q5GLZ8 1057 aaPredicted RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 MIGA2Q7L4E1 593 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 CAGE1Q8TC20 777 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 TBC1D22AQ8WUA7 517 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 TBC1D5Q92609 795 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 FAM212AQ96EL1 285 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 BORCS6Q96GS4 357 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 SCLT1Q96NL6 688 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 NAPGQ99747 312 aaPredicted RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 SH2D3AQ9BRG2 576 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 NHEJ1Q9H9Q4 299 aaPredicted RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 BMP2KQ9NSY1 1161 aaPredicted RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 TRPC5Q9UL62 973 aaPredicted RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 ATP6V0A2Q9Y487 856 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 ARAP2Q8WZ64 1704 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 GOLGA6L9A6NEM1 432 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 LRRC10BA6NIK2 292 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 ZBTB39O15060 712 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 BUB1O43683 1085 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 NBNO60934 754 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 TBC1D8O95759 1140 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 HLA-DOAP06340 250 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 ATP6V1E1P36543 226 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 CERKLQ49MI3 558 aaPredicted RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 TDRD12Q587J7 1177 aaKnown RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 NEK11Q8NG66 645 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 HAS1Q92839 578 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 FAM81BQ96LP2 452 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 P2RX7Q99572 595 aaKnown RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 NCAPGQ9BPX3 1015 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 GTPBP4Q9BZE4 634 aaKnown RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 RIOX1Q9H6W3 641 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 ARFGAP3Q9NP61 516 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 RYDENQ9NUL5 291 aaKnown RBP6.66□□□□□ -1.34
SH3D19-207ENST00000478503 CDC23Q9UJX2 597 aa6.66□□□□□ -1.34
SH3D19-207ENST00000478503 TBX3O15119 743 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 NCK2O43639 380 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 TBC1D12O60347 775 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 RAD17O75943 681 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 AGR2O95994 175 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 GH2P01242 217 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 MYL1P05976 194 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 KRT10P13645 584 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 VSNL1P62760 191 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 RASSF7Q02833 373 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 GPS2Q13227 327 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 PRPF4BQ13523 1007 aaKnown RBP6.65□□□□□ -1.34
SH3D19-207ENST00000478503 PLS1Q14651 629 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 CCDC40Q4G0X9 1142 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 SLFN13Q68D06 897 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 MAEAQ7L5Y9 396 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 CCDC42Q96M95 316 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 MMS19Q96T76 1030 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 A0A1B0GUL6 1792 aa6.65□□□□□ -1.34
SH3D19-207ENST00000478503 PNMA6FA0A0J9YX94 578 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 CCDC66A2RUB6 948 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 H0Y3Z8 333 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 AKR1B10O60218 316 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 ECE1P42892 770 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 POU5F1BQ06416 359 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 MRPL28Q13084 256 aaKnown RBP6.65□□□□□ -1.35
SH3D19-207ENST00000478503 CDC37Q16543 378 aaPredicted RBP6.65□□□□□ -1.35
SH3D19-207ENST00000478503 C21orf62-AS1Q17RA5 79 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 LONRF2Q1L5Z9 754 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 MIIPQ5JXC2 388 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 SRGAP1Q7Z6B7 1085 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 C14orf80Q86SX3 495 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 KSR1Q8IVT5 923 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 SP8Q8IXZ3 490 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 ZNF507Q8TCN5 953 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 CUL5Q93034 780 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 JAKMIP2Q96AA8 810 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 LZTS2Q9BRK4 669 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 COA1Q9GZY4 146 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 ABCB6Q9NP58 842 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 GAKO14976 1311 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 LINC00854A0A1B0GVQ3 168 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 CTAGE15A4D2H0 777 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 MOCS3O95396 460 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 CTAGE8P0CG41 777 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 AMPD3Q01432 767 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 GABPAQ06546 454 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 TERF2Q15554 542 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 SH3BP5LQ7L8J4 393 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 CACNA2D4Q7Z3S7 1137 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 CTAGE6Q86UF2 777 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 GPBP1Q86WP2 473 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 CTAGE4Q8IX94 777 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 ZNF713Q8N859 430 aaPredicted RBP6.65□□□□□ -1.35
SH3D19-207ENST00000478503 DAGLBQ8NCG7 672 aa6.65□□□□□ -1.35
SH3D19-207ENST00000478503 MTMR9Q96QG7 549 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms