RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 LSSP48449 732 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 NFKB2Q00653 900 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 CAP1Q01518 475 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 CATSPEREQ5SY80 951 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 TCERG1LQ5VWI1 586 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 CREB3L3Q68CJ9 461 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 TTLL7Q6ZT98 887 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 FKBP9P1Q75LS8 142 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 SAPCD2Q86UD0 394 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 AFAP1L2Q8N4X5 818 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 SCYL1Q96KG9 808 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 ELF4Q99607 663 aaPredicted RBP5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 H2AFY2Q9P0M6 372 aaPredicted RBP5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 BTBD7Q9P203 1132 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 ARHGAP20Q9P2F6 1191 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 CROTQ9UKG9 612 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 ASB1Q9Y576 335 aa5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 ARID1BQ8NFD5 2236 aaPredicted RBP5.52□□□□□ -1.53
SMARCA1-204ENST00000478420 RASSF10A6NK89 507 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 DBX1A6NMT0 343 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 BRINP1O60477 761 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 FBXO21O94952 628 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 BPIP17213 487 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 THBS2P35442 1172 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 GLRBP48167 497 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 STRA8Q7Z7C7 330 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 NME9Q86XW9 330 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 ERCC4Q92889 916 aaPredicted RBP5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 E2F7Q96AV8 911 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 INCENPQ9NQS7 918 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 TOMM22Q9NS69 142 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 SPTLC3Q9NUV7 552 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 UCKL1Q9NWZ5 548 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 NTMQ9P121 344 aa5.51□□□□□ -1.53
SMARCA1-204ENST00000478420 PRAMEF22A3QJZ6 481 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 GOLGA6L22H0YM25 854 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 PTX3P26022 381 aaPredicted RBP5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 RPL13P26373 211 aaKnown RBP5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 MC4RP32245 332 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 VWA3BQ502W6 1294 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 PHF19Q5T6S3 580 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 PRAMEF18Q5VWM3 479 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 LRRC56Q8IYG6 542 aaPredicted RBP5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 ZZZ3Q8IYH5 903 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 WDR48Q8TAF3 677 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 ZSCAN18Q8TBC5 510 aaPredicted RBP5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 ZCRB1Q8TBF4 217 aaKnown RBP5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 CALML6Q8TD86 181 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 ZNF526Q8TF50 670 aaPredicted RBP5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 EMC7Q9NPA0 242 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 SPATA6Q9NWH7 488 aaPredicted RBP5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 GALNT8Q9NY28 637 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 ZFP69BQ9UJL9 534 aa5.5□□□□□ -1.53
SMARCA1-204ENST00000478420 SH3D21A4FU49 640 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 NEMP1O14524 444 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 FFAR3O14843 346 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 CHGBP05060 677 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 DLX2Q07687 328 aaPredicted RBP5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 RTP5Q14D33 572 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 EPHA7Q15375 998 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 SMAD2Q15796 467 aaKnown RBP5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 ATP13A4Q4VNC1 1196 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 DPP8Q6V1X1 898 aaPredicted RBP5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 CILP2Q8IUL8 1156 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 STPG3Q8N7X2 389 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 C16orf92Q96LL3 132 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 TACO1Q9BSH4 297 aaKnown RBP5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 MCM8Q9UJA3 840 aa5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 APOBEC2Q9Y235 224 aaKnown RBP5.49□□□□□ -1.53
SMARCA1-204ENST00000478420 UBA6A0AVT1 1052 aaPredicted RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 TGM5O43548 720 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 EYA4O95677 639 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 MPIG6BO95866 241 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 IL18BPO95998 194 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 NCLP19338 710 aaKnown RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 IBSPP21815 317 aaPredicted RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 CD40P25942 277 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 CFPP27918 469 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 LSP1P33241 339 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 IL13P35225 146 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 ECE1P42892 770 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 SARSP49591 514 aaKnown RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 MLLT6P55198 1093 aaPredicted RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 SMAD3P84022 425 aaKnown RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 ADCY1Q08828 1119 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 STAT4Q14765 748 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 PTPROQ16827 1216 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 VMACQ2NL98 169 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 PRR31Q5SQ13 230 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 ESRP1Q6NXG1 681 aaKnown RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 TRMT10BQ6PF06 316 aaKnown RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 RTN4RL1Q86UN2 441 aaPredicted RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 ADGRG2Q8IZP9 1017 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 FOXRED1Q96CU9 486 aaPredicted RBP5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 FOXB1Q99853 325 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 BTBD2Q9BX70 525 aa5.48□□□□□ -1.53
SMARCA1-204ENST00000478420 AMNQ9BXJ7 453 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms