RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 COL4A4P53420 1690 aaPredicted RBP16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 PRRC2BQ5JSZ5 2229 aaKnown RBP16.42■□□□□ 0.22
SMARCE1-209ENST00000478349 TRANK1O15050 2925 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 IPO5O00410 1097 aaKnown RBP16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 CYP3A4P08684 503 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 ARP10275 920 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 KRT76Q01546 638 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 APOBRQ0VD83 1088 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 ITGB3BPQ13352 177 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 BTG3Q14201 252 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 JAKMIP3Q5VZ66 844 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 PDXDC2PQ6P474 469 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 CKAP2LQ8IYA6 745 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 SMAP1Q8IYB5 467 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 TRIM22Q8IYM9 498 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 BANK1Q8NDB2 785 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 CYP2W1Q8TAV3 490 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 ATP8B4Q8TF62 1192 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 PPP2R3CQ969Q6 453 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 PCYT2Q99447 389 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 ZNF577Q9BSK1 485 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 RNF26Q9BY78 433 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 ZNF302Q9NR11 478 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 CEP131Q9UPN4 1083 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 KDM3AQ9Y4C1 1321 aa16.41■□□□□ 0.22
SMARCE1-209ENST00000478349 C5orf67F2Z3F1 127 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 PRPF3O43395 683 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 ATG7O95352 703 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 RPS6KB1P23443 525 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 LEXMQ3ZCV2 418 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 ZNF484Q5JVG2 852 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 ZNF746Q6NUN9 644 aaPredicted RBP16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 NPAS4Q8IUM7 802 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 FAM167AQ96KS9 214 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 CELF4Q9BZC1 486 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 C22orf23Q9BZE7 217 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 FAM217BQ9NTX9 383 aaPredicted RBP16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 TMEM260Q9NX78 707 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 IGSF9BQ9UPX0 1349 aa16.4■□□□□ 0.22
SMARCE1-209ENST00000478349 SPTBN5Q9NRC6 3674 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 IGKV6D-21A0A0A0MT36 114 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 DDX39AO00148 427 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 ENPP3O14638 875 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 PSAPP07602 524 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 KCNA5P22460 613 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 CD52P31358 61 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 BMPR1AP36894 532 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 CPLX2Q6PUV4 134 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 MTHFD1LQ6UB35 978 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 SKAP1Q86WV1 359 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 CMTR2Q8IYT2 770 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 ZNF710Q8N1W2 664 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 LRFN2Q9ULH4 789 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 MICAL3Q7RTP6 2002 aa16.39■□□□□ 0.21
SMARCE1-209ENST00000478349 FAM86B1E9PN63 330 aa16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 FAM86B2P0C5J1 330 aa16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 ABHD15Q6UXT9 468 aa16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 BBXQ8WY36 941 aaPredicted RBP16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 NECAB3Q96P71 396 aaPredicted RBP16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 AGXT2Q9BYV1 514 aa16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 SH3GLB2Q9NR46 395 aa16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 PTPRSQ13332 1948 aa16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 SIP14410 1827 aa16.38■□□□□ 0.21
SMARCE1-209ENST00000478349 IGLV3-22A0A075B6J6 115 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 WDR64B1ANS9 1081 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 CPLX1O14810 134 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 GPR182O15218 404 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 ABCB7O75027 752 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 DGKIO75912 1065 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 CCNE2O96020 404 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 NEFLP07196 543 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 IFNAR1P17181 557 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 KLRC1P26715 233 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 PRR16Q569H4 304 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 SWSAP1Q6NVH7 229 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 CCDC60Q8IWA6 550 aaPredicted RBP16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 TRAPPC12Q8WVT3 735 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 PABPC5Q96DU9 382 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 OSBPL7Q9BZF2 842 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 C1orf112Q9NSG2 853 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 PADI3Q9ULW8 664 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 GINS2Q9Y248 185 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 SAMM50Q9Y512 469 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 PCDHA10Q9Y5I2 948 aa16.37■□□□□ 0.21
SMARCE1-209ENST00000478349 DENND3A2RUS2 1198 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 MAGEB2O15479 319 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 RPS6KA5O75582 802 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 CPA1P15085 419 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 COL9A1P20849 921 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 TMOD1P28289 359 aa16.36■□□□□ 0.21
SMARCE1-209ENST00000478349 CIITAP33076 1130 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms