RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	HERVK_113	Q902F9	699 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	MPHOSPH6	Q99547	160 aa	Known RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.85	□□□□□ -1.63	8e-9	■■■□□ 16.3
POLR2B-208	ENST00000478188	SLC6A16	Q9GZN6	736 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	SPC25	Q9HBM1	224 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	MRVI1	Q9Y6F6	885 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	PRUNE2	Q8WUY3	3088 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	EVPL	Q92817	2033 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	IGSF9B	Q9UPX0	1349 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188		B4DLN1	442 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	WNT7A	O00755	349 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	TLL1	O43897	1013 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZEB2	O60315	1214 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	DTNB	O60941	627 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	STBD1	O95210	358 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	S1PR4	O95977	384 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	ATP4A	P20648	1035 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	MRPL12	P52815	198 aa	Known RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	NAPA	P54920	295 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	CCT2	P78371	535 aa	Known RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZNF200	P98182	395 aa	Predicted RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	DGKD	Q16760	1214 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	PKDCC	Q504Y2	493 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	FAM26D	Q5JW98	314 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	SERINC5	Q86VE9	423 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	TRIM50	Q86XT4	487 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	LINC01465	Q8N7H1	131 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	RASGRP4	Q8TDF6	673 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	CEP89	Q96ST8	783 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	UBE2O	Q9C0C9	1292 aa	Known RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	TTYH1	Q9H313	450 aa	Predicted RBP	4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	IL23A	Q9NPF7	189 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	TMEM39A	Q9NV64	488 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	MTMR10	Q9NXD2	777 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	VPS54	Q9P1Q0	977 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	HDAC6	Q9UBN7	1215 aa		4.85	□□□□□ -1.63
POLR2B-208	ENST00000478188	CCDC196	A0A1B0GTZ2	297 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	DCDC2C	A8MYV0	355 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	PPFIA4	O75335	1185 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	CD2BP2	O95400	341 aa	Known RBP	4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	FOS	P01100	380 aa	Predicted RBP	4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	CYP2C9	P11712	490 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	CSF2RA	P15509	400 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	CD46	P15529	392 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	ARHGAP4	P98171	946 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	FPGS	Q05932	587 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	CYFIP1	Q7L576	1253 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	RPAIN	Q86UA6	219 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	ETNPPL	Q8TBG4	499 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	AFAP1L1	Q8TED9	768 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	SPATA33	Q96N06	139 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	GUCD1	Q96NT3	240 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	KCNH7	Q9NS40	1196 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	GJB4	Q9NTQ9	266 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	RTEL1	Q9NZ71	1219 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	SORBS3	O60504	671 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	NBN	O60934	754 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	PPFIA3	O75145	1194 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	DEXI	O95424	95 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	IQCF3	P0C7M6	154 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	SMIM10L2A	P0DMW4	78 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	SMIM10L2B	P0DMW5	78 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	SMAD3	P84022	425 aa	Known RBP	4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	PTK7	Q13308	1070 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	NEDD9	Q14511	834 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	KIAA0753	Q2KHM9	967 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	CEP55	Q53EZ4	464 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	ABHD15	Q6UXT9	468 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	SYNE3	Q6ZMZ3	975 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	DHX37	Q8IY37	1157 aa	Known RBP	4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	SLC5A5	Q92911	643 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	SLC26A6	Q9BXS9	759 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	KDM4C	Q9H3R0	1056 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	HIPK3	Q9H422	1215 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	PCDHA4	Q9UN74	947 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	PLXNA4	Q9HCM2	1894 aa		4.84	□□□□□ -1.63
POLR2B-208	ENST00000478188	LCE2B	O14633	110 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	MAFG	O15525	162 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	DGAT1	O75907	488 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	ARHGEF15	O94989	841 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	MTMR1	Q13613	665 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188		Q4G0T1	1027 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	MOXD1	Q6UVY6	613 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	RUFY4	Q6ZNE9	571 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	CRIPAK	Q8N1N5	446 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	LMBR1	Q8WVP7	490 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	SCLY	Q96I15	445 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	C1QTNF1	Q9BXJ1	281 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	GLT8D2	Q9H1C3	349 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	RNPEP	Q9H4A4	650 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	TLR3	O15455	904 aa	Known RBP	4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	JAK2	O60674	1132 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	PSMD10	O75832	226 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	CKB	P12277	381 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	RFC2	P35250	354 aa		4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	TCF7	P36402	384 aa	Predicted RBP	4.83	□□□□□ -1.64
POLR2B-208	ENST00000478188	SPIRE1	Q08AE8	756 aa		4.83	□□□□□ -1.64

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