RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TTC3P53804 2025 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 DCDC2BA2VCK2 349 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 OPLAHO14841 1288 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 EOMESO95936 686 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 GOLGA8HP0CJ92 632 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 MYCLP12524 364 aaPredicted RBP8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 HOXB3P14651 431 aaPredicted RBP8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 C1QBPQ07021 282 aaKnown RBP8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 ACAP1Q15027 740 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 PGM5Q15124 567 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 CDC37Q16543 378 aaPredicted RBP8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 ATAT1Q5SQI0 421 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 MARCH8Q5T0T0 291 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 GPATCH4Q5T3I0 446 aaKnown RBP8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 METTL7BQ6UX53 244 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 RSPH3Q86UC2 560 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 COLGALT1Q8NBJ5 622 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 IL31RAQ8NI17 732 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 DNAJB3Q8WWF6 145 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 TTC14Q96N46 770 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 TMX1Q9H3N1 280 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 CWH43Q9H720 699 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 DLGAP2Q9P1A6 1054 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 HCSTQ9UBK5 93 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 WNT16Q9UBV4 365 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 PADI3Q9ULW8 664 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 MRPL11Q9Y3B7 192 aaKnown RBP8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 TELO2Q9Y4R8 837 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 CDY2AQ9Y6F7 541 aa8.54□□□□□ -1.04
SPTLC1-205ENST00000477888 KRBA1A5PL33 1030 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 PRR5-ARHGAP8B1AHC4 643 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 NOP56O00567 594 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 HMMRO75330 724 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 CFBP00751 764 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 TGM1P22735 817 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 SARSP49591 514 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 ARHGAP8P85298 464 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 TBC1D8BQ0IIM8 1120 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 VARS2Q5ST30 1063 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 SPOUT1Q5T280 376 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 FAM102BQ5T8I3 360 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 KIAA1841Q6NSI8 718 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 C1orf210Q8IVY1 113 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 ADGRF4Q8IZF3 695 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 MAML2Q8IZL2 1156 aaPredicted RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 GPR161Q8N6U8 529 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 C12orf76Q8N812 135 aaPredicted RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 MRPL43Q8N983 215 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 FEZF2Q8TBJ5 459 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 CHAMP1Q96JM3 812 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 ZFP91Q96JP5 570 aaPredicted RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 RTKNQ9BST9 563 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 KCNK12Q9HB15 430 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 PUF60Q9UHX1 559 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 DBR1Q9UK59 544 aaKnown RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 FBXL21Q9UKT6 434 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 ZNF215Q9UL58 517 aaPredicted RBP8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 CCDC171Q6TFL3 1326 aa8.53□□□□□ -1.04
SPTLC1-205ENST00000477888 C2orf71A6NGG8 1288 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 TBKBP1A7MCY6 615 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 NARSO43776 548 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 CLASP2O75122 1294 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 MRPS6P82932 125 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 NEDD9Q14511 834 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 QRICH1Q2TAL8 776 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 RARS2Q5T160 578 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 UTP14CQ5TAP6 766 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 IER5Q5VY09 327 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 CYFIP1Q7L576 1253 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 BORCS6Q96GS4 357 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 ENTPD7Q9NQZ7 604 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 MAP3K20Q9NYL2 800 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 TUBE1Q9UJT0 475 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 PCDHB7Q9Y5E2 793 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 FASNP49327 2511 aaKnown RBP8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 MYO10Q9HD67 2058 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 ASPMQ8IZT6 3477 aa8.52□□□□□ -1.05
SPTLC1-205ENST00000477888 SMARCA5O60264 1052 aaPredicted RBP8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 MGEA5O60502 916 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 KINO60870 393 aaKnown RBP8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 DCNP07585 359 aaKnown RBP8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 LAG3P18627 525 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 HOXA13P31271 388 aaPredicted RBP8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 FAM189BP81408 668 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 MRPS9P82933 396 aaKnown RBP8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 LMNB2Q03252 620 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 PPFIA1Q13136 1202 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 SEMA3FQ13275 785 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 COL9A3Q14050 684 aaPredicted RBP8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 GRIK4Q16099 956 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 ZMYM1Q5SVZ6 1142 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 XRRA1Q6P2D8 792 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 LRRC55Q6ZSA7 311 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 FAM43BQ6ZT52 329 aaPredicted RBP8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 OTOP3Q7RTS5 596 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 TMC7Q7Z402 723 aa8.51□□□□□ -1.05
SPTLC1-205ENST00000477888 SAMD3Q8N6K7 520 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms