RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 PEAR1Q5VY43 1037 aaPredicted RBP7.42□□□□□ -1.22
LINC00173-202ENST00000477702 ADAMTSL4Q6UY14 1074 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 NOL8Q76FK4 1167 aaKnown RBP7.42□□□□□ -1.22
LINC00173-202ENST00000477702 CLEC10AQ8IUN9 316 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 SLC43A3Q8NBI5 491 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 CCDC74AQ96AQ1 378 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 SLC9A7Q96T83 725 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 SUGCTQ9HAC7 445 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 NPHS2Q9NP85 383 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 FBXO28Q9NVF7 368 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 SERPINB13Q9UIV8 391 aa7.42□□□□□ -1.22
LINC00173-202ENST00000477702 ZNF292O60281 2723 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 KIF4AO95239 1232 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 ALBP02768 609 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 ACTN1P12814 892 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 STAT3P40763 770 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 MCAMP43121 646 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 DDX10Q13206 875 aaKnown RBP7.41□□□□□ -1.22
LINC00173-202ENST00000477702 ERMP1Q7Z2K6 904 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 RIOX2Q8IUF8 465 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 SVOPQ8N4V2 548 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 CEP120Q8N960 986 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 PHOSPHO2Q8TCD6 241 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 NUDT8Q8WV74 236 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 ATOH1Q92858 354 aaPredicted RBP7.41□□□□□ -1.22
LINC00173-202ENST00000477702 DDX11Q96FC9 970 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 BTBD6Q96KE9 485 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 UPF3BQ9BZI7 483 aaKnown RBP7.41□□□□□ -1.22
LINC00173-202ENST00000477702 FTOQ9C0B1 505 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC00173-202ENST00000477702 RASSF4Q9H2L5 321 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 TRMT13Q9NUP7 481 aaKnown RBP7.41□□□□□ -1.22
LINC00173-202ENST00000477702 LMCD1Q9NZU5 365 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 ASTN1O14525 1302 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 ACACBO00763 2458 aa7.41□□□□□ -1.22
LINC00173-202ENST00000477702 DCHS1Q96JQ0 3298 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 SCN5AQ14524 2016 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.4□□□□□ -1.22
LINC00173-202ENST00000477702 TMEM221A6NGB7 291 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 M0R296 226 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 PFKMP08237 780 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 PLCD1P51178 756 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 PSAPL1Q6NUJ1 521 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 CHSY3Q70JA7 882 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 ASCL5Q7RTU5 278 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 ADHFE1Q8IWW8 467 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 GALNT12Q8IXK2 581 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 MIGA1Q8NAN2 632 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 NEK9Q8TD19 979 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 PPP1R13LQ8WUF5 828 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 LPIN3Q9BQK8 851 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 DNAJC25Q9H1X3 360 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 EHD4Q9H223 541 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 AKAP2Q9Y2D5 859 aa7.4□□□□□ -1.22
LINC00173-202ENST00000477702 ATRXP46100 2492 aa7.4□□□□□ -1.23
LINC00173-202ENST00000477702 EP300Q09472 2414 aaPredicted RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 A0A1W2PP55 124 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 VWA5AO00534 786 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 CABYRO75952 493 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 NEFLP07196 543 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 UBTFL1P0CB47 393 aaPredicted RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 CYP7A1P22680 504 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 ID4P47928 161 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 KCNJ6P48051 423 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 CLUL1Q15846 466 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 FSCN1Q16658 493 aaKnown RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 HERC4Q5GLZ8 1057 aaPredicted RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 MAMDC4Q6UXC1 1216 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 SIAH1Q8IUQ4 282 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 SUGP1Q8IWZ8 645 aaKnown RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 MSL3Q8N5Y2 521 aaKnown RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 EDAQ92838 391 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 PMEPA1Q969W9 287 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 PLD4Q96BZ4 506 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 TGS1Q96RS0 853 aaKnown RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 ZKSCAN3Q9BRR0 538 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 SMG9Q9H0W8 520 aaKnown RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 ALDH8A1Q9H2A2 487 aaPredicted RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 ALG13Q9NP73 1137 aaKnown RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 COPRSQ9NQ92 184 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 PRKAG3Q9UGI9 489 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 ZNF214Q9UL59 606 aaPredicted RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 DDX49Q9Y6V7 483 aaKnown RBP7.39□□□□□ -1.23
LINC00173-202ENST00000477702 VPS13AQ96RL7 3174 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 MYO7AQ13402 2215 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 MCM3APO60318 1980 aa7.39□□□□□ -1.23
LINC00173-202ENST00000477702 COL4A6Q14031 1691 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 ANKRD11Q6UB99 2663 aaPredicted RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 PKD1L2Q7Z442 2459 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 TNKSO95271 1327 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 DNAJC25-GNG10A0A024R161 153 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 MED19A0JLT2 244 aaPredicted RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 H0Y858 1186 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 DYNC1LI2O43237 492 aaPredicted RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 GHRHP01286 108 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 ALAS2P22557 587 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 AMPD1P23109 780 aa7.38□□□□□ -1.23
LINC00173-202ENST00000477702 VCPP55072 806 aaKnown RBP7.38□□□□□ -1.23
LINC00173-202ENST00000477702 ERVK-21P61565 698 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms