RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ATAD5Q96QE3 1844 aa19.82■□□□□ 0.76
CCM2-209ENST00000477605 UCHL3P15374 230 aa19.81■□□□□ 0.76
CCM2-209ENST00000477605 MMP14P50281 582 aa19.81■□□□□ 0.76
CCM2-209ENST00000477605 EXOC3L4Q17RC7 722 aa19.81■□□□□ 0.76
CCM2-209ENST00000477605 SLFN13Q68D06 897 aa19.81■□□□□ 0.76
CCM2-209ENST00000477605 APOBEC3HQ6NTF7 200 aaKnown RBP19.81■□□□□ 0.76
CCM2-209ENST00000477605 EFCAB13Q8IY85 973 aa19.81■□□□□ 0.76
CCM2-209ENST00000477605 LMBR1Q8WVP7 490 aa19.81■□□□□ 0.76
CCM2-209ENST00000477605 CALR3Q96L12 384 aaKnown RBP19.81■□□□□ 0.76
CCM2-209ENST00000477605 SPAG5Q96R06 1193 aa19.81■□□□□ 0.76
CCM2-209ENST00000477605 AMNQ9BXJ7 453 aa19.81■□□□□ 0.76
CCM2-209ENST00000477605 A0A0A6YYK5 440 aaPredicted RBP19.8■□□□□ 0.76
CCM2-209ENST00000477605 GTPBP10A4D1E9 387 aaKnown RBP19.8■□□□□ 0.76
CCM2-209ENST00000477605 GFPT2O94808 682 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 XRCC5P13010 732 aaKnown RBP19.8■□□□□ 0.76
CCM2-209ENST00000477605 CIITAP33076 1130 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 CARSP49589 748 aaKnown RBP19.8■□□□□ 0.76
CCM2-209ENST00000477605 GUCY2DQ02846 1103 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 ACTRT1Q8TDG2 376 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 ZIM3Q96PE6 472 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 TYW1Q9NV66 732 aaKnown RBP19.8■□□□□ 0.76
CCM2-209ENST00000477605 SHTN1A0MZ66 631 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 POTEFA5A3E0 1075 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 F8W031 263 aaPredicted RBP19.8■□□□□ 0.76
CCM2-209ENST00000477605 POLRMTO00411 1230 aaKnown RBP19.8■□□□□ 0.76
CCM2-209ENST00000477605 RIMBP2O15034 1052 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 FLOT1O75955 427 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 POTEIP0CG38 1075 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 SPATA31C1P0DKV0 1188 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 SREBF1P36956 1147 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 PTK2Q05397 1052 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 POTEGQ6S5H5 508 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 POTEEQ6S8J3 1075 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 VPS36Q86VN1 386 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 GPIHBP1Q8IV16 184 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 PPM1EQ8WY54 764 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 HINFPQ9BQA5 517 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 POLR3CQ9BUI4 534 aaPredicted RBP19.8■□□□□ 0.76
CCM2-209ENST00000477605 ZHX3Q9H4I2 956 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 NFU1Q9UMS0 254 aa19.8■□□□□ 0.76
CCM2-209ENST00000477605 EBAG9O00559 213 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 KIF4AO95239 1232 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 EEF2P13639 858 aaKnown RBP19.79■□□□□ 0.76
CCM2-209ENST00000477605 PON1P27169 355 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 STAT3P40763 770 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 CACNB1Q02641 598 aaPredicted RBP19.79■□□□□ 0.76
CCM2-209ENST00000477605 ARID5AQ03989 594 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 TTMPQ5BVD1 217 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 ZNF571Q7Z3V5 609 aaPredicted RBP19.79■□□□□ 0.76
CCM2-209ENST00000477605 KRT12Q99456 494 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 NENFQ9UMX5 172 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 NPM3O75607 178 aaKnown RBP19.79■□□□□ 0.76
CCM2-209ENST00000477605 GAP43P17677 238 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 NPEPPSP55786 919 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 GNGT1P63211 74 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 CUL1Q13616 776 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 EPHA7Q15375 998 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 NFIL3Q16649 462 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 PRR16Q569H4 304 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 SFR1Q86XK3 245 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 SCFD2Q8WU76 684 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 ARL8AQ96BM9 186 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 ZDHHC15Q96MV8 337 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 REEP2Q9BRK0 252 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 PACSIN1Q9BY11 444 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 NAGPAQ9UK23 515 aa19.79■□□□□ 0.76
CCM2-209ENST00000477605 HSPA9P38646 679 aaKnown RBP19.78■□□□□ 0.76
CCM2-209ENST00000477605 MRPS25P82663 173 aaKnown RBP19.78■□□□□ 0.76
CCM2-209ENST00000477605 DDR1Q08345 913 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 KDM7AQ6ZMT4 941 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.78■□□□□ 0.76
CCM2-209ENST00000477605 LRRC57Q8N9N7 239 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 GMCL1P1Q8NEA9 526 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 CASKIN2Q8WXE0 1202 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 CCDC43Q96MW1 224 aaKnown RBP19.78■□□□□ 0.76
CCM2-209ENST00000477605 ISCUQ9H1K1 167 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 PI4KBQ9UBF8 816 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 GRIN2DO15399 1336 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 MYH7BA7E2Y1 1941 aa19.78■□□□□ 0.76
CCM2-209ENST00000477605 A0A087WUV0 522 aaPredicted RBP19.77■□□□□ 0.76
CCM2-209ENST00000477605 SPDYE3A6NKU9 549 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 ZEB2O60315 1214 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 CYP3A4P08684 503 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 SLC9A1P19634 815 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 HOXD13P35453 343 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 CASP5P51878 434 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 CERKLQ49MI3 558 aaPredicted RBP19.77■□□□□ 0.76
CCM2-209ENST00000477605 ALKBH5Q6P6C2 394 aaKnown RBP19.77■□□□□ 0.76
CCM2-209ENST00000477605 LRIG3Q6UXM1 1119 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 FMNL3Q8IVF7 1028 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 SYCE1Q8N0S2 351 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 IFT81Q8WYA0 676 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 LENG9Q96B70 501 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 GMCL1Q96IK5 515 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 TAF1DQ9H5J8 278 aaPredicted RBP19.77■□□□□ 0.76
CCM2-209ENST00000477605 OLFML3Q9NRN5 406 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 DAAM1Q9Y4D1 1078 aa19.77■□□□□ 0.76
CCM2-209ENST00000477605 SRRM3A6NNA2 597 aaPredicted RBP19.77■□□□□ 0.75
CCM2-209ENST00000477605 BHMG1C9JSJ3 638 aaPredicted RBP19.77■□□□□ 0.75
CCM2-209ENST00000477605 CCDC188H7C350 402 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms