RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 POLLQ9UGP5 575 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 MED1Q15648 1581 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-220ENST00000477528 HSPA6P17066 643 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 PADI6Q6TGC4 694 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 CABS1Q96KC9 395 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 IL17RBQ9NRM6 502 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 NDC80O14777 642 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 PPM1EQ8WY54 764 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 ZNF653Q96CK0 615 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 CLEC11AQ9Y240 323 aa15.89■□□□□ 0.13
HDAC6-220ENST00000477528 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
HDAC6-220ENST00000477528 IL1R1P14778 569 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 JAK3P52333 1124 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 ANKS1AQ92625 1134 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 DAAM1Q9Y4D1 1078 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 KRT19P08727 400 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 MAGOHBQ96A72 148 aaKnown RBP15.88■□□□□ 0.13
HDAC6-220ENST00000477528 TRIM11Q96F44 468 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 TBC1D22BQ9NU19 505 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 PASKQ96RG2 1323 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 CCDC188H7C350 402 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 MTMR1Q13613 665 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 TBC1D10BQ4KMP7 808 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-220ENST00000477528 MIS18BP1Q6P0N0 1132 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 SLC7A3Q8WY07 619 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 ERGIC2Q96RQ1 377 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 SSU72P8A0A1W2PR75 194 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 PIK3CAP42336 1068 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 KCTD16Q68DU8 428 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 NFRKBQ6P4R8 1299 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 RNF207Q6ZRF8 634 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 BANK1Q8NDB2 785 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 TUFT1Q9NNX1 390 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 ABCC6O95255 1503 aa15.88■□□□□ 0.13
HDAC6-220ENST00000477528 FAM160B1Q5W0V3 765 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 RHOT2Q8IXI1 618 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 PPP1R14CQ8TAE6 165 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 PPANQ9NQ55 473 aaKnown RBP15.87■□□□□ 0.13
HDAC6-220ENST00000477528 MYO1FO00160 1098 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-220ENST00000477528 PAGR1Q9BTK6 254 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 POLD4Q9HCU8 107 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 ADAM21Q9UKJ8 722 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 NPHP3-ACAD11A0A0J9YXS1 232 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 TARSL2A2RTX5 802 aaKnown RBP15.87■□□□□ 0.13
HDAC6-220ENST00000477528 IPO5O00410 1097 aaKnown RBP15.87■□□□□ 0.13
HDAC6-220ENST00000477528 MDM2Q00987 491 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-220ENST00000477528 PSMD14O00487 310 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 P4HBP07237 508 aaKnown RBP15.87■□□□□ 0.13
HDAC6-220ENST00000477528 PSAPP07602 524 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 PEX3P56589 373 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 EDRF1Q3B7T1 1238 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 CEP55Q53EZ4 464 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 ANKFY1Q9P2R3 1169 aa15.87■□□□□ 0.13
HDAC6-220ENST00000477528 GRB10Q13322 594 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 EPHA7Q15375 998 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 SPATS2Q86XZ4 545 aaKnown RBP15.86■□□□□ 0.13
HDAC6-220ENST00000477528 XXYLT1Q8NBI6 393 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 RAB20Q9NX57 234 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 SNX12Q9UMY4 172 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 IVNS1ABPQ9Y6Y0 642 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 SLC37A4O43826 429 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 SNX16P57768 344 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 CUL1Q13616 776 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 AFDNP55196 1824 aaKnown RBP15.86■□□□□ 0.13
HDAC6-220ENST00000477528 PRPF38AQ8NAV1 312 aaKnown RBP15.86■□□□□ 0.13
HDAC6-220ENST00000477528 LXNQ9BS40 222 aa15.86■□□□□ 0.13
HDAC6-220ENST00000477528 SLC16A3O15427 465 aaKnown RBP15.85■□□□□ 0.13
HDAC6-220ENST00000477528 HDLBPQ00341 1268 aaKnown RBP15.85■□□□□ 0.13
HDAC6-220ENST00000477528 TTI2Q6NXR4 508 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 RMDN3Q96TC7 470 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 RIOX1Q9H6W3 641 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 SUGCTQ9HAC7 445 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 SERPINA10Q9UK55 444 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 NFU1Q9UMS0 254 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 DIS3Q9Y2L1 958 aaKnown RBP15.85■□□□□ 0.13
HDAC6-220ENST00000477528 LRRC37A3O60309 1634 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 GRID2IPA4D2P6 1211 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 NCK2O43639 380 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 TNNC2P02585 160 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 ADCY8P40145 1251 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 VSNL1P62760 191 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 PPARDQ03181 441 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 SETDB1Q15047 1291 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 PITPNM2Q9BZ72 1349 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 A0A087X0B3 334 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 WDR64B1ANS9 1081 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 P4HA1P13674 534 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 MAN1A1P33908 653 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 NCAPG2Q86XI2 1143 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 DNAJC7Q99615 494 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 AP1M1Q9BXS5 423 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 RGL1Q9NZL6 768 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 QARSP47897 775 aaKnown RBP15.85■□□□□ 0.13
HDAC6-220ENST00000477528 ERVK-24P63145 666 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 DALRD3Q5D0E6 543 aaKnown RBP15.85■□□□□ 0.13
HDAC6-220ENST00000477528 REEP2Q9BRK0 252 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 TRIM10Q9UDY6 481 aa15.85■□□□□ 0.13
HDAC6-220ENST00000477528 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms