RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 VRK3Q8IV63 474 aa4.56□□□□□ -1.68
XRN1-211ENST00000477237 CCDC140Q96MF4 163 aa4.56□□□□□ -1.68
XRN1-211ENST00000477237 NKRFO15226 690 aaKnown RBP eCLIP4.55□□□□□ -1.68
XRN1-211ENST00000477237 RHOBTB3O94955 611 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 SCNN1GP51170 649 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 EPHA5P54756 1037 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 FANCCQ00597 558 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 PAK2Q13177 524 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 WDR72Q3MJ13 1102 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 SLC35F1Q5T1Q4 408 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 KRTAP5-11Q6L8G4 156 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 FAM169BQ8N8A8 192 aa4.55□□□□□ -1.68
XRN1-211ENST00000477237 GZF1Q9H116 711 aaPredicted RBP4.55□□□□□ -1.68
XRN1-211ENST00000477237 ADCY8P40145 1251 aa4.54□□□□□ -1.68
XRN1-211ENST00000477237 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
XRN1-211ENST00000477237 DBPQ10586 325 aaPredicted RBP4.54□□□□□ -1.68
XRN1-211ENST00000477237 NCAPHQ15003 741 aa4.54□□□□□ -1.68
XRN1-211ENST00000477237 Q6ZRM9 215 aa4.54□□□□□ -1.68
XRN1-211ENST00000477237 OR14K1Q8NGZ2 314 aa4.54□□□□□ -1.68
XRN1-211ENST00000477237 DDX41Q9UJV9 622 aaKnown RBP4.54□□□□□ -1.68
XRN1-211ENST00000477237 PACSIN3Q9UKS6 424 aa4.54□□□□□ -1.68
XRN1-211ENST00000477237 SH3BP1Q9Y3L3 701 aa4.54□□□□□ -1.68
XRN1-211ENST00000477237 A0A0A6YYK5 440 aaPredicted RBP4.53□□□□□ -1.68
XRN1-211ENST00000477237 ZAR1LA6NP61 321 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 HGFACQ04756 655 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 TOB2Q14106 344 aaPredicted RBP4.53□□□□□ -1.68
XRN1-211ENST00000477237 SV2CQ496J9 727 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 HABP4Q5JVS0 413 aaKnown RBP4.53□□□□□ -1.68
XRN1-211ENST00000477237 TRIM68Q6AZZ1 485 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 ADGRG3Q86Y34 549 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 SHCBP1Q8NEM2 672 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 HAS1Q92839 578 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 OR10A2Q9H208 303 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 LRP2BPQ9P2M1 347 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 CDC42EP3Q9UKI2 254 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 DSEQ9UL01 958 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 NUB1Q9Y5A7 615 aa4.53□□□□□ -1.68
XRN1-211ENST00000477237 SLC26A4O43511 780 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 PTGS2P35354 604 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 MRE11P49959 708 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 IL13RA1P78552 427 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 EIF4HQ15056 248 aaKnown RBP4.52□□□□□ -1.69
XRN1-211ENST00000477237 EPHA10Q5JZY3 1008 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 KCTD1Q719H9 257 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 FILIP1Q7Z7B0 1213 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 KCNJ15Q99712 375 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 GPR27Q9NS67 375 aa4.52□□□□□ -1.69
XRN1-211ENST00000477237 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.51□□□□□ -1.69
XRN1-211ENST00000477237 CAPNS1P04632 268 aa4.51□□□□□ -1.69
XRN1-211ENST00000477237 GNAT1P11488 350 aa4.51□□□□□ -1.69
XRN1-211ENST00000477237 CD38P28907 300 aa4.51□□□□□ -1.69
XRN1-211ENST00000477237 SPIRE1Q08AE8 756 aa4.51□□□□□ -1.69
XRN1-211ENST00000477237 SPATA32Q96LK8 384 aa4.51□□□□□ -1.69
XRN1-211ENST00000477237 MPHOSPH9Q99550 1183 aa4.51□□□□□ -1.69
XRN1-211ENST00000477237 MLST8Q9BVC4 326 aa4.51□□□□□ -1.69
XRN1-211ENST00000477237 SYNPO2LQ9H987 977 aa4.51□□□□□ -1.69
XRN1-211ENST00000477237 PMS2P1A4D2B8 440 aa4.5□□□□□ -1.69
XRN1-211ENST00000477237 FAM20BO75063 409 aa4.5□□□□□ -1.69
XRN1-211ENST00000477237 CNGB1Q14028 1251 aaPredicted RBP4.5□□□□□ -1.69
XRN1-211ENST00000477237 ZNF362Q5T0B9 420 aaPredicted RBP4.5□□□□□ -1.69
XRN1-211ENST00000477237 RHOUQ7L0Q8 258 aa4.5□□□□□ -1.69
XRN1-211ENST00000477237 ANKRD35Q8N283 1001 aa4.5□□□□□ -1.69
XRN1-211ENST00000477237 RASGRP4Q8TDF6 673 aa4.5□□□□□ -1.69
XRN1-211ENST00000477237 BACH2Q9BYV9 841 aa4.5□□□□□ -1.69
XRN1-211ENST00000477237 CD244Q9BZW8 370 aa4.5□□□□□ -1.69
XRN1-211ENST00000477237 FBXO10Q9UK96 956 aa4.5□□□□□ -1.69
XRN1-211ENST00000477237 GRID2IPA4D2P6 1211 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 TRAF5O00463 557 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 CDK4P11802 303 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 GRK2P25098 689 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 GRK3P35626 688 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 GRIA2P42262 883 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 RIN1Q13671 783 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 SAFB2Q14151 953 aaKnown RBP eCLIP4.49□□□□□ -1.69
XRN1-211ENST00000477237 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 CXXC5Q7LFL8 322 aaKnown RBP4.49□□□□□ -1.69
XRN1-211ENST00000477237 SLC25A43Q8WUT9 341 aaPredicted RBP4.49□□□□□ -1.69
XRN1-211ENST00000477237 LENG9Q96B70 501 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 PHF20Q9BVI0 1012 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 METTL5Q9NRN9 209 aaKnown RBP4.49□□□□□ -1.69
XRN1-211ENST00000477237 ARHGAP28Q9P2N2 729 aa4.49□□□□□ -1.69
XRN1-211ENST00000477237 NASPP49321 788 aaPredicted RBP4.48□□□□□ -1.69
XRN1-211ENST00000477237 MAN2A2P49641 1150 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 MEOX1P50221 254 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 STILQ15468 1287 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 STRIP1Q5VSL9 837 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 OLFML1Q6UWY5 402 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 C6orf15Q6UXA7 325 aaPredicted RBP4.48□□□□□ -1.69
XRN1-211ENST00000477237 ZNF662Q6ZS27 426 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 RTKN2Q8IZC4 609 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 SH3RF2Q8TEC5 729 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 CPLX3Q8WVH0 158 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 GPRASP2Q96D09 838 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 COL4A3Q01955 1670 aa4.48□□□□□ -1.69
XRN1-211ENST00000477237 XDHP47989 1333 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 FAM90A27PA6NNH2 459 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 KIAA0355O15063 1070 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 SUSD5O60279 629 aa4.47□□□□□ -1.69
XRN1-211ENST00000477237 CLK3P49761 638 aaKnown RBP4.47□□□□□ -1.69
XRN1-211ENST00000477237 MAP4K2Q12851 820 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms