RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 PCDHB9Q9Y5E1 797 aa6.53□□□□□ -1.36
SPTLC3-205ENST00000476791 EMILIN1Q9Y6C2 1016 aa6.53□□□□□ -1.36
SPTLC3-205ENST00000476791 ATAD2Q6PL18 1390 aa6.53□□□□□ -1.36
SPTLC3-205ENST00000476791 MYPNQ86TC9 1320 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 UBAP1LF5GYI3 381 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 GOLGA8MH3BSY2 632 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 SIN3BO75182 1162 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ATP5BP06576 529 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 HEXBP07686 556 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 GARTP22102 1010 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 XPAP23025 273 aaPredicted RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 MCM3P25205 808 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 CETN2P41208 172 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 GCLCP48506 637 aaPredicted RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 BASP1P80723 227 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 CENPCQ03188 943 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 KDSRQ06136 332 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 MSLNQ13421 630 aaPredicted RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 SCARF1Q14162 830 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 LETM2Q2VYF4 491 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 MMEL1Q495T6 779 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 EAPPQ56P03 285 aaPredicted RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 TMEM132EQ6IEE7 984 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 SLC30A9Q6PML9 568 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ENOSF1Q7L5Y1 443 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 KIAA1328Q86T90 577 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 SLC9B2Q86UD5 537 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ZNF565Q8N9K5 539 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 IL17REQ8NFR9 667 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ZNF594Q96JF6 807 aaPredicted RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 LLPHQ9BRT6 129 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 UPF3BQ9BZI7 483 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 SIL1Q9H173 461 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 STIM2Q9P246 746 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 EXOC7Q9UPT5 735 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ZNF536O15090 1300 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 H0Y626 953 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 H3BRB1 525 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ATP5JP18859 108 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 PPP1R2P41236 205 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 EPS15P42566 896 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 CLNS1AP54105 237 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 IFIT5Q13325 482 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 TUBA3CQ13748 450 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 GALEQ14376 348 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 MLC1Q15049 377 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 SAFBQ15424 915 aaKnown RBP eCLIP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 SLC27A3Q5K4L6 730 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 TWF2Q6IBS0 349 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 PPP1R2P3Q6NXS1 205 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 C1orf228Q6PIY5 440 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ABRAXAS1Q6UWZ7 409 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 NUP54Q7Z3B4 507 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ZNF619Q8N2I2 560 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 TUT1Q9H6E5 874 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ACAD9Q9H845 621 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 WDR6Q9NNW5 1121 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 ZNF277Q9NRM2 450 aaPredicted RBP6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 CFL2Q9Y281 166 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 LEMD3Q9Y2U8 911 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 TELO2Q9Y4R8 837 aa6.52□□□□□ -1.37
SPTLC3-205ENST00000476791 GPR75-ASB3A0A0A6YYF3 556 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 ARHGAP10A1A4S6 786 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 GOLGA8IPA6NC78 632 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 GOLGA6L10A6NI86 522 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 CAPN14A8MX76 684 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 EYA2O00167 538 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 KRIT1O00522 736 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 RNF113AO15541 343 aaKnown RBP6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 SLC7A4O43246 635 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 RIPK2O43353 540 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 GREM1O60565 184 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 BCRP11274 1271 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 PMLP29590 882 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 ASMTP46597 345 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 YBEYP58557 167 aaPredicted RBP6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 TFAP4Q01664 338 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 SQSTM1Q13501 440 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 ZNF792Q3KQV3 632 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 AARDQ4LEZ3 155 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 LDHAL6AQ6ZMR3 332 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 KIRREL3Q8IZU9 778 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 PLPP7Q8NBV4 271 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 SAMD11Q96NU1 681 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 CATSPER2Q96P56 530 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 ALS2CR12Q96Q35 445 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 PCDHGA2Q9Y5H1 932 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 GOLGA6L7A0A1B0GV03 622 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 TRIM43BA6NCK2 446 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 CDK2AP1O14519 115 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 FYB1O15117 783 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 KCNQ2O43526 872 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 STRNO43815 780 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 EXTL3O43909 919 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 POU2F1P14859 743 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 PHKA1P46020 1223 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 HTR3AP46098 478 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 GPC3P51654 580 aa6.51□□□□□ -1.37
SPTLC3-205ENST00000476791 CLCN4P51793 760 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms