RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 CYFIP1Q7L576 1253 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 LMBR1Q8WVP7 490 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 APBB2Q92870 758 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 MAP3K14Q99558 947 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 IFIH1Q9BYX4 1025 aaKnown RBP12.01□□□□□ -0.49
PGK1-203ENST00000476531 CHMP5Q9NZZ3 219 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 MTMR6Q9Y217 621 aa12.01□□□□□ -0.49
PGK1-203ENST00000476531 PNMA6FA0A0J9YX94 578 aa12□□□□□ -0.49
PGK1-203ENST00000476531 C5orf67F2Z3F1 127 aa12□□□□□ -0.49
PGK1-203ENST00000476531 NOP56O00567 594 aaKnown RBP12□□□□□ -0.49
PGK1-203ENST00000476531 ADAMTS3O15072 1205 aa12□□□□□ -0.49
PGK1-203ENST00000476531 STAM2O75886 525 aa12□□□□□ -0.49
PGK1-203ENST00000476531 CHRNA1P02708 482 aa12□□□□□ -0.49
PGK1-203ENST00000476531 GNAT1P11488 350 aa12□□□□□ -0.49
PGK1-203ENST00000476531 KIF5BP33176 963 aa12□□□□□ -0.49
PGK1-203ENST00000476531 TRAF1Q13077 416 aa12□□□□□ -0.49
PGK1-203ENST00000476531 NEDD9Q14511 834 aa12□□□□□ -0.49
PGK1-203ENST00000476531 CTC1Q2NKJ3 1217 aa12□□□□□ -0.49
PGK1-203ENST00000476531 RUFY4Q6ZNE9 571 aa12□□□□□ -0.49
PGK1-203ENST00000476531 RPAINQ86UA6 219 aa12□□□□□ -0.49
PGK1-203ENST00000476531 EHMT1Q9H9B1 1298 aa12□□□□□ -0.49
PGK1-203ENST00000476531 RC3H2Q9HBD1 1191 aaKnown RBP12□□□□□ -0.49
PGK1-203ENST00000476531 RTEL1Q9NZ71 1219 aa12□□□□□ -0.49
PGK1-203ENST00000476531 PRKAG3Q9UGI9 489 aa12□□□□□ -0.49
PGK1-203ENST00000476531 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
PGK1-203ENST00000476531 STK36Q9NRP7 1315 aa12□□□□□ -0.49
PGK1-203ENST00000476531 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 VPS37CA5D8V6 355 aaPredicted RBP11.99□□□□□ -0.49
PGK1-203ENST00000476531 GRM6O15303 877 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 PRPF3O43395 683 aaKnown RBP11.99□□□□□ -0.49
PGK1-203ENST00000476531 FIBPO43427 364 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 STX6O43752 255 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 CDKL5O76039 1030 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 BRD1O95696 1058 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 CTNNB1P35222 781 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 BMPR1AP36894 532 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 HMGN5P82970 282 aaKnown RBP11.99□□□□□ -0.49
PGK1-203ENST00000476531 ARHGAP4P98171 946 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 MGAT3Q09327 533 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 UTP14CQ5TAP6 766 aaKnown RBP11.99□□□□□ -0.49
PGK1-203ENST00000476531 LARP1BQ659C4 914 aaKnown RBP11.99□□□□□ -0.49
PGK1-203ENST00000476531 EP400NLQ6ZTU2 488 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 ADHFE1Q8IWW8 467 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 FIBCD1Q8N539 461 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 FAM184AQ8NB25 1140 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 UIMC1Q96RL1 719 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 LMAN2LQ9H0V9 348 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 CLDND1Q9NY35 253 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
PGK1-203ENST00000476531 FAM50BQ9Y247 325 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 TRIOO75962 3097 aa11.99□□□□□ -0.49
PGK1-203ENST00000476531 USP34Q70CQ2 3546 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 RALGAPA2Q2PPJ7 1873 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 NLRC5Q86WI3 1866 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 ADGRA3Q8IWK6 1321 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 NRCAMQ92823 1304 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 NCK2O43639 380 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 RB1P06400 928 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 GHRP10912 638 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 IRS1P35568 1242 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 NHLH1Q02575 133 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 DLX2Q07687 328 aaPredicted RBP11.98□□□□□ -0.49
PGK1-203ENST00000476531 HYAL1Q12794 435 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 LPIN1Q14693 890 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 CSPP1Q1MSJ5 1256 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 TYW1BQ6NUM6 668 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
PGK1-203ENST00000476531 FERMT3Q86UX7 667 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
PGK1-203ENST00000476531 CLP1Q92989 425 aaKnown RBP11.98□□□□□ -0.49
PGK1-203ENST00000476531 ZNF689Q96CS4 500 aaPredicted RBP11.98□□□□□ -0.49
PGK1-203ENST00000476531 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 C11orf84Q9BUA3 381 aaPredicted RBP11.98□□□□□ -0.49
PGK1-203ENST00000476531 SPZ1Q9BXG8 430 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 RNF26Q9BY78 433 aaPredicted RBP11.98□□□□□ -0.49
PGK1-203ENST00000476531 VPS54Q9P1Q0 977 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 ZNF215Q9UL58 517 aaPredicted RBP11.98□□□□□ -0.49
PGK1-203ENST00000476531 KCNJ14Q9UNX9 436 aa11.98□□□□□ -0.49
PGK1-203ENST00000476531 MYO7AQ13402 2215 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 ENPP3O14638 875 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 MBTPS2O43462 519 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 DEXIO95424 95 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
PGK1-203ENST00000476531 GTF2F1P35269 517 aaKnown RBP eCLIP11.97□□□□□ -0.491e-7■■■■■ 27.7
PGK1-203ENST00000476531 GNAQP50148 359 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 SP4Q02446 784 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 SMAD2Q15796 467 aaKnown RBP11.97□□□□□ -0.49
PGK1-203ENST00000476531 FOXD4L6Q3SYB3 417 aaPredicted RBP11.97□□□□□ -0.49
PGK1-203ENST00000476531 PCNX4Q63HM2 1172 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 WWC2Q6AWC2 1192 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 FOXD4L3Q6VB84 417 aaPredicted RBP11.97□□□□□ -0.49
PGK1-203ENST00000476531 TRIM22Q8IYM9 498 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 C8orf76Q96K31 380 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 FBXL18Q96ME1 805 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 RWDD3Q9Y3V2 267 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 DOCK5Q9H7D0 1870 aa11.97□□□□□ -0.49
PGK1-203ENST00000476531 MBLAC1A4D2B0 266 aaPredicted RBP11.96□□□□□ -0.49
PGK1-203ENST00000476531 MEIS2O14770 477 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms