RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 PDCP20941 246 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.2
ABCF3-211ENST00000475728 PPP2R5CQ13362 524 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 HIC1Q14526 733 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 CALCRLQ16602 461 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 C9orf50Q5SZB4 431 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 B3GNT9Q6UX72 402 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 ZNF365Q70YC5 407 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 RPAINQ86UA6 219 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.27■□□□□ 0.2
ABCF3-211ENST00000475728 NRBP2Q9NSY0 501 aa16.27■□□□□ 0.2
ABCF3-211ENST00000475728 IGSF9BQ9UPX0 1349 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 RSPH10B2B2RC85 870 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 RSPH10BP0C881 870 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 ACRP10323 421 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 IGBP1P78318 339 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 ZNF618Q5T7W0 954 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 HERVK_113Q902F9 699 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 SNX21Q969T3 373 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 FTOQ9C0B1 505 aaKnown RBP eCLIP16.26■□□□□ 0.19
ABCF3-211ENST00000475728 STXBP5LQ9Y2K9 1186 aa16.26■□□□□ 0.19
ABCF3-211ENST00000475728 K7ELQ4 463 aaPredicted RBP16.25■□□□□ 0.19
ABCF3-211ENST00000475728 ATP2B1P20020 1258 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 MARCH8Q5T0T0 291 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 LARP1BQ659C4 914 aaKnown RBP16.25■□□□□ 0.19
ABCF3-211ENST00000475728 MCTP1Q6DN14 999 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 C16orf59Q7L2K0 433 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 DEFB128Q7Z7B8 93 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 HAS1Q92839 578 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 GJA10Q969M2 543 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 INTS4Q96HW7 963 aaKnown RBP16.25■□□□□ 0.19
ABCF3-211ENST00000475728 VAV3Q9UKW4 847 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 PCDHA12Q9UN75 941 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 PCDHA2Q9Y5H9 948 aa16.25■□□□□ 0.19
ABCF3-211ENST00000475728 M0QZ92 97 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 MAGEB2O15479 319 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 CXCL10P02778 98 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 OATP04181 439 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 MCM7P33993 719 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 PSMC5P62195 406 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 PRKCEQ02156 737 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 EPHA7Q15375 998 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 XKR3Q5GH77 459 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 TTC38Q5R3I4 469 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 GPR153Q6NV75 609 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 HSCBQ8IWL3 235 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 NME8Q8N427 588 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 WNT8BQ93098 351 aa16.24■□□□□ 0.19
ABCF3-211ENST00000475728 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-211ENST00000475728 SMIM35A0A1B0GVV1 85 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-211ENST00000475728 EFCAB14O75071 495 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 BAIAP3O94812 1187 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 P4HBP07237 508 aaKnown RBP16.23■□□□□ 0.19
ABCF3-211ENST00000475728 ATP4AP20648 1035 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 KLRC1P26715 233 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 QARSP47897 775 aaKnown RBP16.23■□□□□ 0.19
ABCF3-211ENST00000475728 SMAD3P84022 425 aaKnown RBP16.23■□□□□ 0.19
ABCF3-211ENST00000475728 FAM26DQ5JW98 314 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 RASIP1Q5U651 963 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 IER5Q5VY09 327 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 CNKSR3Q6P9H4 555 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 TRAF7Q6Q0C0 670 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 MTHFD1LQ6UB35 978 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 OTOP2Q7RTS6 562 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 ZNF710Q8N1W2 664 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 NEK9Q8TD19 979 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 MTMR9Q96QG7 549 aa16.23■□□□□ 0.19
ABCF3-211ENST00000475728 TTC12Q9H892 705 aaPredicted RBP16.23■□□□□ 0.19
ABCF3-211ENST00000475728 ZBBXA8MT70 800 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 KIF28PB7ZC32 967 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 ZNF862O60290 1169 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 CTSHP09668 335 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 TMOD1P28289 359 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 TXKP42681 527 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 RILPL1Q5EBL4 403 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 NCAPH2Q6IBW4 605 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 RUFY4Q6ZNE9 571 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 TRAPPC12Q8WVT3 735 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 DNAJB3Q8WWF6 145 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 FAM49AQ9H0Q0 323 aaPredicted RBP16.22■□□□□ 0.19
ABCF3-211ENST00000475728 MTMR10Q9NXD2 777 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 PPME1Q9Y570 386 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 SLC4A7Q9Y6M7 1214 aa16.22■□□□□ 0.19
ABCF3-211ENST00000475728 ABHD14A-ACY1A0A1B0GW23 586 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 EML1O00423 815 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 LAD1O00515 517 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 NBNO60934 754 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 OR52Z1P0C646 297 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 MRPS6P82932 125 aaKnown RBP16.21■□□□□ 0.19
ABCF3-211ENST00000475728 IKBKEQ14164 716 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 ZNF174Q15697 407 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 UGCGQ16739 394 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 TMEM266Q2M3C6 531 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
ABCF3-211ENST00000475728 TRMT1LQ7Z2T5 733 aaKnown RBP16.21■□□□□ 0.19
ABCF3-211ENST00000475728 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.21■□□□□ 0.19
ABCF3-211ENST00000475728 EXOC8Q8IYI6 725 aa16.21■□□□□ 0.19
ABCF3-211ENST00000475728 SEPT8Q92599 483 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms