RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 NUCB1Q02818 461 aa16.1■□□□□ 0.17
FAM3A-218ENST00000475657 GRIK4Q16099 956 aa16.1■□□□□ 0.17
FAM3A-218ENST00000475657 MARCH8Q5T0T0 291 aa16.1■□□□□ 0.17
FAM3A-218ENST00000475657 GIMAP8Q8ND71 665 aaPredicted RBP16.1■□□□□ 0.17
FAM3A-218ENST00000475657 ZSCAN10Q96SZ4 725 aaPredicted RBP16.1■□□□□ 0.17
FAM3A-218ENST00000475657 SEMA4AQ9H3S1 761 aa16.1■□□□□ 0.17
FAM3A-218ENST00000475657 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
FAM3A-218ENST00000475657 CEP250Q9BV73 2442 aa16.1■□□□□ 0.17
FAM3A-218ENST00000475657 MYH6P13533 1939 aa16.09■□□□□ 0.17
FAM3A-218ENST00000475657 MED19A0JLT2 244 aaPredicted RBP16.09■□□□□ 0.17
FAM3A-218ENST00000475657 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
FAM3A-218ENST00000475657 ENAHQ8N8S7 591 aaPredicted RBP16.09■□□□□ 0.17
FAM3A-218ENST00000475657 ERAP1Q9NZ08 941 aa16.09■□□□□ 0.17
FAM3A-218ENST00000475657 LRFN2Q9ULH4 789 aa16.09■□□□□ 0.17
FAM3A-218ENST00000475657 PADI3Q9ULW8 664 aa16.09■□□□□ 0.17
FAM3A-218ENST00000475657 NEDD4P46934 1319 aa16.09■□□□□ 0.17
FAM3A-218ENST00000475657 ACACBO00763 2458 aa16.09■□□□□ 0.17
FAM3A-218ENST00000475657 DMXL1Q9Y485 3027 aa16.09■□□□□ 0.17
FAM3A-218ENST00000475657 KIAA1671Q9BY89 1806 aa16.08■□□□□ 0.17
FAM3A-218ENST00000475657 RRN3P2A6NIE6 340 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 KLRF2D3W0D1 207 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 SARSP49591 514 aaKnown RBP16.08■□□□□ 0.16
FAM3A-218ENST00000475657 ITIH3Q06033 890 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 XRRA1Q6P2D8 792 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 DGLUCYQ7Z3D6 616 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 RMDN1Q96DB5 314 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 ADAM7Q9H2U9 754 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 MFSD1Q9H3U5 465 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 NGRNQ9NPE2 291 aaKnown RBP16.08■□□□□ 0.16
FAM3A-218ENST00000475657 TMEM260Q9NX78 707 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 PUF60Q9UHX1 559 aaKnown RBP16.08■□□□□ 0.16
FAM3A-218ENST00000475657 TELO2Q9Y4R8 837 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 IGSF9BQ9UPX0 1349 aa16.08■□□□□ 0.16
FAM3A-218ENST00000475657 C2CD4DB7Z1M9 353 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 ZNF213O14771 459 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 TCF7P36402 384 aaPredicted RBP16.07■□□□□ 0.16
FAM3A-218ENST00000475657 GATMP50440 423 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 PLCB3Q01970 1234 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 PAK2Q13177 524 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 SPOUT1Q5T280 376 aaKnown RBP16.07■□□□□ 0.16
FAM3A-218ENST00000475657 CES5AQ6NT32 575 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 CHD1LQ86WJ1 897 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 THNSL1Q8IYQ7 743 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 ZDHHC14Q8IZN3 488 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 CASP10Q92851 521 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 PCDHB7Q9Y5E2 793 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 TRPV2Q9Y5S1 764 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 KDM3AQ9Y4C1 1321 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 PLXNA4Q9HCM2 1894 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 KMT2BQ9UMN6 2715 aaPredicted RBP16.07■□□□□ 0.16
FAM3A-218ENST00000475657 DNAH14Q0VDD8 3507 aa16.07■□□□□ 0.16
FAM3A-218ENST00000475657 M0QZ92 97 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 AOC1P19801 751 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 SDSP20132 328 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 SP100P23497 879 aaPredicted RBP16.06■□□□□ 0.16
FAM3A-218ENST00000475657 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
FAM3A-218ENST00000475657 CCDC105Q8IYK2 499 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 COLGALT1Q8NBJ5 622 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
FAM3A-218ENST00000475657 TMX1Q9H3N1 280 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 SMARCAD1Q9H4L7 1026 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 POMKQ9H5K3 350 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 RTEL1Q9NZ71 1219 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 USTQ9Y2C2 406 aa16.06■□□□□ 0.16
FAM3A-218ENST00000475657 OTOGLQ3ZCN5 2332 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 PALM3A6NDB9 673 aaPredicted RBP16.05■□□□□ 0.16
FAM3A-218ENST00000475657 LAG3P18627 525 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 MTHFRP42898 656 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 SP4Q02446 784 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 PCNX4Q63HM2 1172 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
FAM3A-218ENST00000475657 NLRX1Q86UT6 975 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 NME8Q8N427 588 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 TNPO1Q92973 898 aaKnown RBP16.05■□□□□ 0.16
FAM3A-218ENST00000475657 TCF25Q9BQ70 676 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 APOL5Q9BWW9 433 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 CELF4Q9BZC1 486 aaKnown RBP16.05■□□□□ 0.16
FAM3A-218ENST00000475657 RIOX1Q9H6W3 641 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 C1orf112Q9NSG2 853 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 TYW1Q9NV66 732 aaKnown RBP16.05■□□□□ 0.16
FAM3A-218ENST00000475657 PCDHA2Q9Y5H9 948 aa16.05■□□□□ 0.16
FAM3A-218ENST00000475657 GSTTP1A0A1W2PQM5 241 aa16.04■□□□□ 0.16
FAM3A-218ENST00000475657 TBKBP1A7MCY6 615 aa16.04■□□□□ 0.16
FAM3A-218ENST00000475657 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
FAM3A-218ENST00000475657 MFAP1P55081 439 aaKnown RBP16.04■□□□□ 0.16
FAM3A-218ENST00000475657 ANGPT1Q15389 498 aa16.04■□□□□ 0.16
FAM3A-218ENST00000475657 PLPP4Q5VZY2 271 aa16.04■□□□□ 0.16
FAM3A-218ENST00000475657 CWF19L1Q69YN2 538 aaKnown RBP16.04■□□□□ 0.16
FAM3A-218ENST00000475657 GLG1Q92896 1179 aa16.04■□□□□ 0.16
FAM3A-218ENST00000475657 CDHR1Q96JP9 859 aa16.04■□□□□ 0.16
FAM3A-218ENST00000475657 RTP3Q9BQQ7 232 aa16.04■□□□□ 0.16
FAM3A-218ENST00000475657 FAM49AQ9H0Q0 323 aaPredicted RBP16.04■□□□□ 0.16
FAM3A-218ENST00000475657 SMOC2Q9H3U7 446 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms