RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	GAS7	O60861	476 aa		18.72	■□□□□ 0.59
VPS8-222	ENST00000475580	CHRNA1	P02708	482 aa		18.72	■□□□□ 0.59
VPS8-222	ENST00000475580	PSAP	P07602	524 aa		18.72	■□□□□ 0.59
VPS8-222	ENST00000475580	WDR5	P61964	334 aa	Known RBP	18.72	■□□□□ 0.59
VPS8-222	ENST00000475580	LRCH2	Q5VUJ6	765 aa		18.72	■□□□□ 0.59
VPS8-222	ENST00000475580	KRT40	Q6A162	431 aa		18.72	■□□□□ 0.59
VPS8-222	ENST00000475580	LLPH	Q9BRT6	129 aa	Known RBP	18.72	■□□□□ 0.59
VPS8-222	ENST00000475580	MICAL3	Q7RTP6	2002 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	HBP1	O60381	514 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	MYOG	P15173	224 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	RAB30	Q15771	203 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	PLEKHG4	Q58EX7	1191 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	PPP4R3A	Q6IN85	833 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	DBF4B	Q8NFT6	615 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	PHOSPHO2	Q8TCD6	241 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	DNAJB3	Q8WWF6	145 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	TBC1D32	Q96NH3	1257 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	SLC9A7	Q96T83	725 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	NKX2-4	Q9H2Z4	354 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	KCNMB3	Q9NPA1	279 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	DISC1	Q9NRI5	854 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	GABBR1	Q9UBS5	961 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	PCDHA2	Q9Y5H9	948 aa		18.71	■□□□□ 0.59
VPS8-222	ENST00000475580	ABHD14A-ACY1	A0A1B0GW23	586 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	BTBD18	B2RXH4	712 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	CHMP2A	O43633	222 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	ZNF862	O60290	1169 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	CD2BP2	O95400	341 aa	Known RBP	18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	DEFB103A	P81534	67 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	UGCG	Q16739	394 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	MTHFD1L	Q6UB35	978 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	HERC6	Q8IVU3	1022 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	DIS3L2	Q8IYB7	885 aa	Known RBP	18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	TNPO1	Q92973	898 aa	Known RBP	18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	CDX2	Q99626	313 aa	Predicted RBP	18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	ZNF576	Q9H609	170 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	BRMS1	Q9HCU9	246 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	TCEAL9	Q9UHQ7	104 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	SAMM50	Q9Y512	469 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	PCDHA11	Q9Y5I1	949 aa		18.7	■□□□□ 0.58
VPS8-222	ENST00000475580	COL1A2	P08123	1366 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	WNT7A	O00755	349 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	CCNT1	O60563	726 aa	Known RBP	18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	GCFC2	P16383	781 aa	Known RBP	18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	SFN	P31947	248 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	JAK3	P52333	1124 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	GRIN2C	Q14957	1233 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	ZNF484	Q5JVG2	852 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	BBX	Q8WY36	941 aa	Predicted RBP	18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	HAS1	Q92839	578 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	FAM49A	Q9H0Q0	323 aa	Predicted RBP	18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	UPF2	Q9HAU5	1272 aa	Known RBP	18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	MSRA	Q9UJ68	235 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	VAV3	Q9UKW4	847 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	STXBP5L	Q9Y2K9	1186 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	CDY2A	Q9Y6F7	541 aa		18.69	■□□□□ 0.58
VPS8-222	ENST00000475580	SMIM35	A0A1B0GVV1	85 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	KLRC1	P26715	233 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	KCNJ6	P48051	423 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	MRPS6	P82932	125 aa	Known RBP	18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	GUCY1B3	Q02153	619 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	IKBKE	Q14164	716 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	MIER3	Q7Z3K6	550 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	RSPH3	Q86UC2	560 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	POTED	Q86YR6	584 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	RDM1	Q8NG50	284 aa		18.68	■□□□□ 0.58
VPS8-222	ENST00000475580	EFCAB14	O75071	495 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	C22orf31	O95567	290 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	HMGN5	P82970	282 aa	Known RBP	18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	TRIM29	Q14134	588 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	LPIN1	Q14693	890 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	FBXO47	Q5MNV8	452 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	CKAP2L	Q8IYA6	745 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	MYLIP	Q8WY64	445 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	SEPT8	Q92599	483 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	FAM20A	Q96MK3	541 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	NAP1L4	Q99733	375 aa	Known RBP	18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	EVPL	Q92817	2033 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	CHD9	Q3L8U1	2897 aa		18.67	■□□□□ 0.58
VPS8-222	ENST00000475580	LOXHD1	Q8IVV2	1947 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	EML1	O00423	815 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	TBX3	O15119	743 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	ST18	O60284	1047 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	ARHGEF15	O94989	841 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	STBD1	O95210	358 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	OAT	P04181	439 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	RPLP2	P05387	115 aa	Known RBP	18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	GHR	P10912	638 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	PRKCE	Q02156	737 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	TMEM62	Q0P6H9	643 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	PPP2R5C	Q13362	524 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	KIAA0319L	Q8IZA0	1049 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	C8orf76	Q96K31	380 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	FAM167A	Q96KS9	214 aa		18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	IFIH1	Q9BYX4	1025 aa	Known RBP	18.66	■□□□□ 0.58
VPS8-222	ENST00000475580	TRPV2	Q9Y5S1	764 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms