RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 USP26Q9BXU7 913 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 UBA5Q9GZZ9 404 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 PPP4R2Q9NY27 417 aa16.27■□□□□ 0.2
ATG9A-220ENST00000475339 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
ATG9A-220ENST00000475339 FGAP02671 866 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 GOLGA8HP0CJ92 632 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 STAG3L1P0CL83 205 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 CDC37Q16543 378 aaPredicted RBP16.26■□□□□ 0.19
ATG9A-220ENST00000475339 TSHZ1Q6ZSZ6 1077 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 THNSL1Q8IYQ7 743 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 CHAMP1Q96JM3 812 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 TCF25Q9BQ70 676 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 TOMM22Q9NS69 142 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 HCSTQ9UBK5 93 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 FBXL21Q9UKT6 434 aa16.26■□□□□ 0.19
ATG9A-220ENST00000475339 CFBP00751 764 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 SNHG28P0DPA3 235 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 TGFB3P10600 412 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 CHMLP26374 656 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 ITIH3Q06033 890 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 TPRNQ4KMQ1 711 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 TAF2Q6P1X5 1199 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 DNAJB3Q8WWF6 145 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 PDCD2LQ9BRP1 358 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 AAASQ9NRG9 546 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 CDY2AQ9Y6F7 541 aa16.25■□□□□ 0.19
ATG9A-220ENST00000475339 DCDC2BA2VCK2 349 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 SCG2P13521 617 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 MTHFRP42898 656 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 HAND2P61296 217 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 BMP2KLQ5H9B9 411 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 ZC3H14Q6PJT7 736 aaKnown RBP16.24■□□□□ 0.19
ATG9A-220ENST00000475339 VSIG10LQ86VR7 867 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 SUMF1Q8NBK3 374 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 IL31RAQ8NI17 732 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 CASP10Q92851 521 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 DSCC1Q9BVC3 393 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 FTHL17Q9BXU8 183 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 ENTPD7Q9NQZ7 604 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 ANAPC4Q9UJX5 808 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 LRFN2Q9ULH4 789 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 TELO2Q9Y4R8 837 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 HCFC2Q9Y5Z7 792 aa16.24■□□□□ 0.19
ATG9A-220ENST00000475339 NRCAMQ92823 1304 aa16.23■□□□□ 0.19
ATG9A-220ENST00000475339 STK25O00506 426 aa16.23■□□□□ 0.19
ATG9A-220ENST00000475339 ORC4O43929 436 aa16.23■□□□□ 0.19
ATG9A-220ENST00000475339 SDHBP21912 280 aa16.23■□□□□ 0.19
ATG9A-220ENST00000475339 RRP12Q5JTH9 1297 aaKnown RBP16.23■□□□□ 0.19
ATG9A-220ENST00000475339 UTP14CQ5TAP6 766 aaKnown RBP16.23■□□□□ 0.19
ATG9A-220ENST00000475339 RSPH3Q86UC2 560 aa16.23■□□□□ 0.19
ATG9A-220ENST00000475339 RNF41Q9H4P4 317 aaPredicted RBP16.23■□□□□ 0.19
ATG9A-220ENST00000475339 DBR1Q9UK59 544 aaKnown RBP16.23■□□□□ 0.19
ATG9A-220ENST00000475339 ZNF215Q9UL58 517 aaPredicted RBP16.23■□□□□ 0.19
ATG9A-220ENST00000475339 MRPL11Q9Y3B7 192 aaKnown RBP16.23■□□□□ 0.19
ATG9A-220ENST00000475339 ANKRD11Q6UB99 2663 aaPredicted RBP16.22■□□□□ 0.19
ATG9A-220ENST00000475339 TBKBP1A7MCY6 615 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 ZNF213O14771 459 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 ADRB1P08588 477 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 SP9P0CG40 484 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 TDGQ13569 410 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
ATG9A-220ENST00000475339 RARS2Q5T160 578 aaKnown RBP16.22■□□□□ 0.19
ATG9A-220ENST00000475339 KANK3Q6NY19 840 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 CASC1Q6TDU7 716 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 C12orf76Q8N812 135 aaPredicted RBP16.22■□□□□ 0.19
ATG9A-220ENST00000475339 COLGALT1Q8NBJ5 622 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 GPR20Q99678 358 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 CYP26B1Q9NR63 512 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 TYW1Q9NV66 732 aaKnown RBP16.22■□□□□ 0.19
ATG9A-220ENST00000475339 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
ATG9A-220ENST00000475339 PADI3Q9ULW8 664 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 USTQ9Y2C2 406 aa16.22■□□□□ 0.19
ATG9A-220ENST00000475339 OPLAHO14841 1288 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 EOMESO95936 686 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 FGRP09769 529 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 PCP11498 1178 aaKnown RBP16.21■□□□□ 0.19
ATG9A-220ENST00000475339 HSD17B4P51659 736 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 MRPS6P82932 125 aaKnown RBP16.21■□□□□ 0.19
ATG9A-220ENST00000475339 PGM5Q15124 567 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 GPATCH4Q5T3I0 446 aaKnown RBP16.21■□□□□ 0.19
ATG9A-220ENST00000475339 FAM102BQ5T8I3 360 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 MFSD6Q6ZSS7 791 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 CYFIP1Q7L576 1253 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 ADGRF4Q8IZF3 695 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 MRPS27Q92552 414 aaKnown RBP16.21■□□□□ 0.19
ATG9A-220ENST00000475339 NGRNQ9NPE2 291 aaKnown RBP16.21■□□□□ 0.19
ATG9A-220ENST00000475339 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 PUF60Q9UHX1 559 aaKnown RBP16.21■□□□□ 0.19
ATG9A-220ENST00000475339 CDV3Q9UKY7 258 aaKnown RBP16.21■□□□□ 0.19
ATG9A-220ENST00000475339 DUSP12Q9UNI6 340 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 LZTS1Q9Y250 596 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 PCDHB7Q9Y5E2 793 aa16.21■□□□□ 0.19
ATG9A-220ENST00000475339 KAT6AQ92794 2004 aa16.21■□□□□ 0.18
ATG9A-220ENST00000475339 CACNA1IQ9P0X4 2223 aa16.21■□□□□ 0.18
ATG9A-220ENST00000475339 HOXB3P14651 431 aaPredicted RBP16.2■□□□□ 0.18
ATG9A-220ENST00000475339 SPECC1Q5M775 1068 aa16.2■□□□□ 0.18
ATG9A-220ENST00000475339 ATAT1Q5SQI0 421 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms