RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 ATG7O95352 703 aa20.38■□□□□ 0.85
PCGF3-209ENST00000475288 FOSP01100 380 aaPredicted RBP20.38■□□□□ 0.85
PCGF3-209ENST00000475288 RXRAP19793 462 aa20.38■□□□□ 0.85
PCGF3-209ENST00000475288 ACTR2P61160 394 aa20.38■□□□□ 0.85
PCGF3-209ENST00000475288 PLCB4Q15147 1175 aa20.38■□□□□ 0.85
PCGF3-209ENST00000475288 NECTIN1Q15223 517 aa20.38■□□□□ 0.85
PCGF3-209ENST00000475288 SPPL3Q8TCT6 385 aa20.38■□□□□ 0.85
PCGF3-209ENST00000475288 CELF4Q9BZC1 486 aaKnown RBP20.38■□□□□ 0.85
PCGF3-209ENST00000475288 FAM49AQ9H0Q0 323 aaPredicted RBP20.38■□□□□ 0.85
PCGF3-209ENST00000475288 ALG13Q9NP73 1137 aaKnown RBP20.38■□□□□ 0.85
PCGF3-209ENST00000475288 PKD2L1Q9P0L9 805 aa20.38■□□□□ 0.85
PCGF3-209ENST00000475288 TRPC6Q9Y210 931 aa20.38■□□□□ 0.85
PCGF3-209ENST00000475288 SLC27A2O14975 620 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 ITGB1P05556 798 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 SCG2P13521 617 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 STAT5BP51692 787 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 PAK2Q13177 524 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 CEP55Q53EZ4 464 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 HEATR3Q7Z4Q2 680 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 EFHBQ8N7U6 833 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 UIMC1Q96RL1 719 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 RIC8AQ9NPQ8 531 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 RNF216Q9NWF9 866 aaPredicted RBP20.37■□□□□ 0.85
PCGF3-209ENST00000475288 LOXHD1Q8IVV2 1947 aa20.37■□□□□ 0.85
PCGF3-209ENST00000475288 IGKV6D-21A0A0A0MT36 114 aa20.36■□□□□ 0.85
PCGF3-209ENST00000475288 hCG_1984214I3L0E3 225 aa20.36■□□□□ 0.85
PCGF3-209ENST00000475288 GTF2F1P35269 517 aaKnown RBP eCLIP20.36■□□□□ 0.854e-8■■■■■ 28.6
PCGF3-209ENST00000475288 NIPA1Q7RTP0 329 aa20.36■□□□□ 0.85
PCGF3-209ENST00000475288 ZNF713Q8N859 430 aaPredicted RBP20.36■□□□□ 0.85
PCGF3-209ENST00000475288 RBM28Q9NW13 759 aaKnown RBP20.36■□□□□ 0.85
PCGF3-209ENST00000475288 CNTNAP5Q8WYK1 1306 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 hCG_1642624A0A1W2PR95 340 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 STXBP3O00186 592 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 MEIS1O00470 390 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 LINC01565O15544 149 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 DNAJB1P25685 340 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 KRT76Q01546 638 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 UBE3AQ05086 875 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 COASYQ13057 564 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 AP3B2Q13367 1082 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 COL9A3Q14050 684 aaPredicted RBP20.35■□□□□ 0.85
PCGF3-209ENST00000475288 CREB3L3Q68CJ9 461 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 WWC2Q6AWC2 1192 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 MTHFD1LQ6UB35 978 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 KLHL23Q8NBE8 558 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 SMRP1Q8NCR6 262 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 CYP2W1Q8TAV3 490 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 ZBTB10Q96DT7 871 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 MFSD14AQ96MC6 490 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 GLT8D2Q9H1C3 349 aa20.35■□□□□ 0.85
PCGF3-209ENST00000475288 AGO4Q9HCK5 861 aaKnown RBP20.35■□□□□ 0.85
PCGF3-209ENST00000475288 COL1A2P08123 1366 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 ZNF318Q5VUA4 2279 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 FSD2A1L4K1 749 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 SREBF1P36956 1147 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 SARSP49591 514 aaKnown RBP20.34■□□□□ 0.85
PCGF3-209ENST00000475288 NDUFV1P49821 464 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 ITGB3BPQ13352 177 aaPredicted RBP20.34■□□□□ 0.85
PCGF3-209ENST00000475288 CLUL1Q15846 466 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 ODR4Q5SWX8 454 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 SYNE3Q6ZMZ3 975 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 HFE2Q6ZVN8 426 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 MICU3Q86XE3 530 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 RNF135Q8IUD6 432 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 CCDC82Q8N4S0 544 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 TRAPPC12Q8WVT3 735 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 POF1BQ8WVV4 589 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 ESYT1Q9BSJ8 1104 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 TMX1Q9H3N1 280 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 IGFLR1Q9H665 355 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 CLEC1BQ9P126 229 aa20.34■□□□□ 0.85
PCGF3-209ENST00000475288 HBP1O60381 514 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 ARP10275 920 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 NAPAP54920 295 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 NHLH1Q02575 133 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 TMEM62Q0P6H9 643 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 FUT2Q10981 343 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 TYW1BQ6NUM6 668 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 APOA5Q6Q788 366 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 BMP8AQ7Z5Y6 402 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 EDAQ92838 391 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 YTHDC1Q96MU7 727 aaKnown RBP20.33■□□□□ 0.85
PCGF3-209ENST00000475288 ANO3Q9BYT9 981 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 ERVK-5Q9HDB9 667 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 C1orf112Q9NSG2 853 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 MUTYHQ9UIF7 546 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 LRFN2Q9ULH4 789 aa20.33■□□□□ 0.85
PCGF3-209ENST00000475288 CLK2P49760 499 aaKnown RBP20.32■□□□□ 0.84
PCGF3-209ENST00000475288 ADCY7P51828 1080 aa20.32■□□□□ 0.84
PCGF3-209ENST00000475288 CBX2Q14781 532 aaPredicted RBP20.32■□□□□ 0.84
PCGF3-209ENST00000475288 FAM160B1Q5W0V3 765 aa20.32■□□□□ 0.84
PCGF3-209ENST00000475288 ABHD15Q6UXT9 468 aa20.32■□□□□ 0.84
PCGF3-209ENST00000475288 ADGRD2Q7Z7M1 963 aa20.32■□□□□ 0.84
PCGF3-209ENST00000475288 ALYREFQ86V81 257 aaKnown RBP20.32■□□□□ 0.84
PCGF3-209ENST00000475288 ATP8B4Q8TF62 1192 aa20.32■□□□□ 0.84
PCGF3-209ENST00000475288 FBXL18Q96ME1 805 aa20.32■□□□□ 0.84
PCGF3-209ENST00000475288 AAASQ9NRG9 546 aa20.32■□□□□ 0.84
PCGF3-209ENST00000475288 RGS18Q9NS28 235 aa20.32■□□□□ 0.84
PCGF3-209ENST00000475288 FNDC1Q4ZHG4 1894 aaPredicted RBP20.32■□□□□ 0.84
PCGF3-209ENST00000475288 PLXNA4Q9HCM2 1894 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms