RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 ZNF577Q9BSK1 485 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 TSPYL1Q9H0U9 437 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 FEZ2Q9UHY8 353 aaPredicted RBP13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 TPCN1Q9ULQ1 816 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 STK36Q9NRP7 1315 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 LAMA2P24043 3122 aaKnown RBP13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 RRN3P2A6NIE6 340 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 KIF28PB7ZC32 967 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 ATG7O95352 703 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 STAT5BP51692 787 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 AK2P54819 239 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 IKBKEQ14164 716 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 GRIK4Q16099 956 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 RPAINQ86UA6 219 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 RSPH3Q86UC2 560 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 RASGRP4Q8TDF6 673 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 TUBE1Q9UJT0 475 aa13.03□□□□□ -0.32
HLA-DOB-208ENST00000475235 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 MBLAC1A4D2B0 266 aaPredicted RBP13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 ADAMTS3O15072 1205 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 FOSL2P15408 326 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 KRT76Q01546 638 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 MBTPS1Q14703 1052 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 GRIN2CQ14957 1233 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 PRR16Q569H4 304 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 FAM160B1Q5W0V3 765 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 ZNF746Q6NUN9 644 aaPredicted RBP13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 MIS18BP1Q6P0N0 1132 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 HERC6Q8IVU3 1022 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 BLIDQ8IZY5 108 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 MYLIPQ8WY64 445 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 WASF1Q92558 559 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 TSPAN18Q96SJ8 248 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 PCYT2Q99447 389 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 NKX2-4Q9H2Z4 354 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 YBX2Q9Y2T7 364 aaKnown RBP13.02□□□□□ -0.33
HLA-DOB-208ENST00000475235 TANC1Q9C0D5 1861 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 VGLL3A8MV65 326 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 DDX39AO00148 427 aaKnown RBP13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 BACH1O14867 736 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 CCNE2O96020 404 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 CTSHP09668 335 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 INSRRP14616 1297 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 NEK4P51957 841 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 RABGGTBP53611 331 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 FAM26DQ5JW98 314 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 ABHD15Q6UXT9 468 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 TBCKQ8TEA7 893 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 SEPT8Q92599 483 aa13.01□□□□□ -0.33
HLA-DOB-208ENST00000475235 POTEB3A0JP26 581 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 PLCB4Q15147 1175 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 POTEBQ6S5H4 581 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 KRT25Q7Z3Z0 450 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 SDR16C5Q8N3Y7 309 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 DBF4BQ8NFT6 615 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 APBB2Q92870 758 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 SGSM3Q96HU1 749 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 GAS2L1Q99501 681 aaPredicted RBP13□□□□□ -0.33
HLA-DOB-208ENST00000475235 ZNF302Q9NR11 478 aa13□□□□□ -0.33
HLA-DOB-208ENST00000475235 M0R2N6 131 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 HBP1O60381 514 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 SEC24BO95487 1268 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 PSAPP07602 524 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 IGBP1P78318 339 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 NONOQ15233 471 aaKnown RBP eCLIP12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 Q4G0T1 1027 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 MARCH8Q5T0T0 291 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 PDXDC2PQ6P474 469 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 MOXD1Q6UVY6 613 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 SLC17A8Q8NDX2 589 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 ATP8B4Q8TF62 1192 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 GTF3C6Q969F1 213 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 LENG9Q96B70 501 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 AIFM3Q96NN9 605 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 RIT2Q99578 217 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 PHF20Q9BVI0 1012 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 ORC3Q9UBD5 711 aaPredicted RBP12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 PCDHA10Q9Y5I2 948 aa12.99□□□□□ -0.33
HLA-DOB-208ENST00000475235 CYP3A7-CYP3A51PA0A087WV96 503 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 WDR64B1ANS9 1081 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 MSH4O15457 936 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 TLL1O43897 1013 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 AMHP03971 560 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 CA3P07451 260 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 CYP3A7P24462 503 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 NUBP1P53384 320 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 NPY5RQ15761 445 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 ME3Q16798 604 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 IER5Q5VY09 327 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 SWSAP1Q6NVH7 229 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 RUFY4Q6ZNE9 571 aa12.98□□□□□ -0.33
HLA-DOB-208ENST00000475235 CCDC60Q8IWA6 550 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms