RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 PPFIA1Q13136 1202 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 ITGB3BPQ13352 177 aaPredicted RBP10.72□□□□□ -0.69
PDPN-204ENST00000475043 MBTPS1Q14703 1052 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 GRIK4Q16099 956 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 TRAF7Q6Q0C0 670 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 NIPA1Q7RTP0 329 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 TMCO2Q7Z6W1 182 aaPredicted RBP10.72□□□□□ -0.69
PDPN-204ENST00000475043 RASGRP4Q8TDF6 673 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 PPM1EQ8WY54 764 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 TUBE1Q9UJT0 475 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 IPO5O00410 1097 aaKnown RBP10.71□□□□□ -0.69
PDPN-204ENST00000475043 BACH1O14867 736 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 EFCAB14O75071 495 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 CAND2O75155 1236 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 DEXIO95424 95 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 CYP3A4P08684 503 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 SIP14410 1827 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 STAT5BP51692 787 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 ADAM17P78536 824 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 TCTN1Q2MV58 587 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 FAM117BQ6P1L5 589 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 RUFY4Q6ZNE9 571 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 RSPH3Q86UC2 560 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.71□□□□□ -0.69
PDPN-204ENST00000475043 DBF4BQ8NFT6 615 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 TNPO1Q92973 898 aaKnown RBP10.71□□□□□ -0.69
PDPN-204ENST00000475043 ZNF577Q9BSK1 485 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 CERS4Q9HA82 394 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 SH3GLB2Q9NR46 395 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 TCEAL9Q9UHQ7 104 aa10.71□□□□□ -0.69
PDPN-204ENST00000475043 EYSQ5T1H1 3165 aa10.71□□□□□ -0.7
PDPN-204ENST00000475043 MICAL3Q7RTP6 2002 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 IGLV3-22A0A075B6J6 115 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 RRN3P2A6NIE6 340 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 ARHGAP33O14559 1287 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 INSRRP14616 1297 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 ANAPC15P60006 121 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 SETQ01105 290 aaPredicted RBP10.7□□□□□ -0.7
PDPN-204ENST00000475043 PRR16Q569H4 304 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 PLEKHG4Q58EX7 1191 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 FAM160B1Q5W0V3 765 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 TAF2Q6P1X5 1199 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 PLPPR4Q7Z2D5 763 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 MYOCDQ8IZQ8 938 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 DNAJB3Q8WWF6 145 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 CRYGNQ8WXF5 182 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 SEPT8Q92599 483 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 ZBTB10Q96DT7 871 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 PCYT2Q99447 389 aa10.7□□□□□ -0.7
PDPN-204ENST00000475043 SLKQ9H2G2 1235 aaPredicted RBP10.7□□□□□ -0.7
PDPN-204ENST00000475043 EIF5BO60841 1220 aaKnown RBP10.69□□□□□ -0.7
PDPN-204ENST00000475043 CDKL5O76039 1030 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 CCNE2O96020 404 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 AMHP03971 560 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 SCRN1Q12765 414 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 PLCB4Q15147 1175 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 ANKRD1Q15327 319 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 CCDC85BQ15834 202 aaPredicted RBP10.69□□□□□ -0.7
PDPN-204ENST00000475043 MARCH8Q5T0T0 291 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 MIS18BP1Q6P0N0 1132 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.69□□□□□ -0.7
PDPN-204ENST00000475043 CKAP2LQ8IYA6 745 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 TRAPPC12Q8WVT3 735 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 ARNTL2Q8WYA1 636 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 AIFM3Q96NN9 605 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 IFIH1Q9BYX4 1025 aaKnown RBP10.69□□□□□ -0.7
PDPN-204ENST00000475043 OSBPL7Q9BZF2 842 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 FAM49AQ9H0Q0 323 aaPredicted RBP10.69□□□□□ -0.7
PDPN-204ENST00000475043 ZNF302Q9NR11 478 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 TBC1D22BQ9NU19 505 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 TPCN1Q9ULQ1 816 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 PCDHA4Q9UN74 947 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 SAMM50Q9Y512 469 aa10.69□□□□□ -0.7
PDPN-204ENST00000475043 MYH9P35579 1960 aaKnown RBP10.68□□□□□ -0.7
PDPN-204ENST00000475043 LOXHD1Q8IVV2 1947 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 LCHNA4D1U4 455 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 MBLAC1A4D2B0 266 aaPredicted RBP10.68□□□□□ -0.7
PDPN-204ENST00000475043 M0QZ92 97 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 RFXAPO00287 272 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 DLL1O00548 723 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 DHX15O43143 795 aaKnown RBP10.68□□□□□ -0.7
PDPN-204ENST00000475043 DTNBO60941 627 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 UPP2O95045 317 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 ATG7O95352 703 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 GJB5O95377 273 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 CHRNA1P02708 482 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 GHRP10912 638 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 SLC26A2P50443 739 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 AK2P54819 239 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 TAP1Q03518 808 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 TMEM62Q0P6H9 643 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 ADGRE1Q14246 886 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 FAM26DQ5JW98 314 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 PDXDC2PQ6P474 469 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 ABHD15Q6UXT9 468 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 TRMT1LQ7Z2T5 733 aaKnown RBP10.68□□□□□ -0.7
PDPN-204ENST00000475043 CCDC60Q8IWA6 550 aaPredicted RBP10.68□□□□□ -0.7
PDPN-204ENST00000475043 BLIDQ8IZY5 108 aa10.68□□□□□ -0.7
PDPN-204ENST00000475043 MICALL1Q8N3F8 863 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms