RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 ANO3Q9BYT9 981 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 EHMT1Q9H9B1 1298 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 SUGCTQ9HAC7 445 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 AGO4Q9HCK5 861 aaKnown RBP13.46□□□□□ -0.25
CLIP2-204ENST00000474962 JPH1Q9HDC5 661 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-204ENST00000474962 SH3GLB2Q9NR46 395 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 SLC9A2Q9UBY0 812 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 SMC3Q9UQE7 1217 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 INSL6Q9Y581 213 aa13.46□□□□□ -0.25
CLIP2-204ENST00000474962 PTPRSQ13332 1948 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-204ENST00000474962 CAND2O75155 1236 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 CTDNEP1O95476 244 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 INSRRP14616 1297 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 ZNF76P36508 570 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 ACTR2P61160 394 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 ERVK-21P61565 698 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 BECN1Q14457 450 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 GDPD5Q8WTR4 605 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 DNAJB3Q8WWF6 145 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 TOP1MTQ969P6 601 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 TGS1Q96RS0 853 aaKnown RBP13.45□□□□□ -0.26
CLIP2-204ENST00000474962 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-204ENST00000474962 VPS54Q9P1Q0 977 aa13.45□□□□□ -0.26
CLIP2-204ENST00000474962 MBLAC1A4D2B0 266 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-204ENST00000474962 FAM86B1E9PN63 330 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 JAK2O60674 1132 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 FAM86B2P0C5J1 330 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 GHRP10912 638 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 BMP1P13497 986 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 SREBF1P36956 1147 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 HTRA4P83105 476 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-204ENST00000474962 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 FAM177A1Q8N128 213 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-204ENST00000474962 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 SDF4Q9BRK5 362 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 IFIH1Q9BYX4 1025 aaKnown RBP13.44□□□□□ -0.26
CLIP2-204ENST00000474962 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 TUBE1Q9UJT0 475 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 KAT6AQ92794 2004 aa13.44□□□□□ -0.26
CLIP2-204ENST00000474962 DDX39AO00148 427 aaKnown RBP13.43□□□□□ -0.26
CLIP2-204ENST00000474962 ENPP3O14638 875 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 DTNBO60941 627 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 ATG7O95352 703 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 CCNE2O96020 404 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 STAT5BP51692 787 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 MGAT3Q09327 533 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 LPIN1Q14693 890 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 PLCB4Q15147 1175 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 MCTP2Q6DN12 878 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 TAF2Q6P1X5 1199 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 TEX2Q8IWB9 1127 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 ADAMTS19Q8TE59 1207 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 FAM49AQ9H0Q0 323 aaPredicted RBP13.43□□□□□ -0.26
CLIP2-204ENST00000474962 AZI2Q9H6S1 392 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 NCOR1O75376 2440 aa13.43□□□□□ -0.26
CLIP2-204ENST00000474962 NFASCO94856 1347 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 RRN3P2A6NIE6 340 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 DHX15O43143 795 aaKnown RBP13.42□□□□□ -0.26
CLIP2-204ENST00000474962 FDPSP14324 419 aaKnown RBP13.42□□□□□ -0.26
CLIP2-204ENST00000474962 KCNQ1P51787 676 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 FOSBP53539 338 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 TMEM62Q0P6H9 643 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 ST3GAL1Q11201 340 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 AP3B2Q13367 1082 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 GNL2Q13823 731 aaKnown RBP13.42□□□□□ -0.26
CLIP2-204ENST00000474962 SAFBQ15424 915 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLIP2-204ENST00000474962 GALNT17Q6IS24 598 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 ABHD15Q6UXT9 468 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 RSPH3Q86UC2 560 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 PLA2G4DQ86XP0 818 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 CRYGNQ8WXF5 182 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 C8orf76Q96K31 380 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 NECAB3Q96P71 396 aaPredicted RBP13.42□□□□□ -0.26
CLIP2-204ENST00000474962 YME1L1Q96TA2 773 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 AGO3Q9H9G7 860 aaKnown RBP13.42□□□□□ -0.26
CLIP2-204ENST00000474962 DAXXQ9UER7 740 aaPredicted RBP13.42□□□□□ -0.26
CLIP2-204ENST00000474962 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 CDY2AQ9Y6F7 541 aa13.42□□□□□ -0.26
CLIP2-204ENST00000474962 IGLV3-22A0A075B6J6 115 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 POTEB3A0JP26 581 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 TNFRSF10AO00220 468 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 CYP3A4P08684 503 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 GJB2P29033 226 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 CUL4AQ13619 759 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 EPC2Q52LR7 807 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 FBXO47Q5MNV8 452 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 POTEBQ6S5H4 581 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 NIPA1Q7RTP0 329 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 RTN4RL1Q86UN2 441 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-204ENST00000474962 REXO1Q8N1G1 1221 aaKnown RBP13.41□□□□□ -0.26
CLIP2-204ENST00000474962 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
CLIP2-204ENST00000474962 RASGRP4Q8TDF6 673 aa13.41□□□□□ -0.26
CLIP2-204ENST00000474962 APBB2Q92870 758 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms