RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 RIC8AQ9NPQ8 531 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 SNX24Q9Y343 169 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 UTP11Q9Y3A2 253 aaKnown RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 SPDYE3A6NKU9 549 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 EIF4E1BA6NMX2 242 aaKnown RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 HIBCHQ6NVY1 386 aaPredicted RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 MAEAQ7L5Y9 396 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 PRPF38AQ8NAV1 312 aaKnown RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 RAPGEF5Q92565 580 aa13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 INPP4AQ96PE3 977 aaPredicted RBP13.18□□□□□ -0.3
SKIV2L-208ENST00000474839 FAM196BA6NMK8 535 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 PJA2O43164 708 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 CHMP2AO43633 222 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 GCNT3O95395 438 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 USH1GQ495M9 461 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 PRR16Q569H4 304 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 RUFY4Q6ZNE9 571 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 GLYCTKQ8IVS8 523 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 DYDC1Q8WWB3 177 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 NR2E1Q9Y466 385 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 CEP83Q9Y592 693 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 C6orf229H3BNL8 230 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 LRRN2O75325 713 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 XRCC5P13010 732 aaKnown RBP13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 CASP4P49662 377 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 UAP1Q16222 522 aaPredicted RBP13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 AADACL2Q6P093 401 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 VPS36Q86VN1 386 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 ANKRD2Q9GZV1 360 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 PSTPIP2Q9H939 334 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 PTPN22Q9Y2R2 807 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 DNM1LO00429 736 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 H2AFZP0C0S5 128 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 UCHL3P15374 230 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 PSMC6P62333 389 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 PPP2R2AP63151 447 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 ITIH3Q06033 890 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 KCNA1Q09470 495 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 TBC1D10BQ4KMP7 808 aaPredicted RBP13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 GKAP1Q5VSY0 366 aaPredicted RBP13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 H2AFVQ71UI9 128 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 OTUD6AQ7L8S5 288 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 SCFD1Q8WVM8 642 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 RNF14Q9UBS8 474 aa13.17□□□□□ -0.3
SKIV2L-208ENST00000474839 CHD4Q14839 1912 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 A6NNZ2 444 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 USP17L10C9JJH3 530 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 LRRC14Q15048 493 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 TUBB8Q3ZCM7 444 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 TPTE2Q6XPS3 522 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 CCDC26Q8TAB7 109 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 ZKSCAN4Q969J2 545 aaPredicted RBP13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 ISCUQ9H1K1 167 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 PRDM16Q9HAZ2 1276 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 AHDC1Q5TGY3 1603 aaPredicted RBP13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 DUOX1Q9NRD9 1551 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 DISP2A7MBM2 1401 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 FLOT1O75955 427 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 LDHCP07864 332 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 GBP2P32456 591 aaPredicted RBP13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 FNTAP49354 379 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 MFSD14BQ5SR56 506 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 BARGINQ6ZT62 677 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 TBC1D1Q86TI0 1168 aaPredicted RBP13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 IQCDQ96DY2 449 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 MTMR9Q96QG7 549 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 ELAC2Q9BQ52 826 aaKnown RBP13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 NAGPAQ9UK23 515 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
SKIV2L-208ENST00000474839 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 CHUKO15111 745 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 CAND2O75155 1236 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 UFL1O94874 794 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 RSPH10BP0C881 870 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 MYBP10242 640 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 NAA25Q14CX7 972 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 SF3B3Q15393 1217 aaKnown RBP13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 SNCBQ16143 134 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 SFR1Q86XK3 245 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 GCNT4Q9P109 453 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 SPATA31A6Q5VVP1 1343 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 SLIT2O94813 1529 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 LCA5LO95447 670 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms