RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 VEGFBP49765 207 aa23.27■■□□□ 1.32
SH3D21-202ENST00000474766 SKIDA1Q1XH10 827 aa23.27■■□□□ 1.32
SH3D21-202ENST00000474766 FIGNQ5HY92 759 aa23.27■■□□□ 1.32
SH3D21-202ENST00000474766 UNC13DQ70J99 1090 aa23.27■■□□□ 1.32
SH3D21-202ENST00000474766 LARP4BQ92615 738 aaKnown RBP23.27■■□□□ 1.32
SH3D21-202ENST00000474766 CNOT6LQ96LI5 555 aaKnown RBP23.27■■□□□ 1.32
SH3D21-202ENST00000474766 NHEJ1Q9H9Q4 299 aaPredicted RBP23.27■■□□□ 1.32
SH3D21-202ENST00000474766 NDUFAB1O14561 156 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 HLA-DOAP06340 250 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 TCP1P17987 556 aaKnown RBP23.26■■□□□ 1.31
SH3D21-202ENST00000474766 GLE1Q53GS7 698 aaKnown RBP23.26■■□□□ 1.31
SH3D21-202ENST00000474766 MIIPQ5JXC2 388 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 TTBK2Q6IQ55 1244 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.26■■□□□ 1.31
SH3D21-202ENST00000474766 OTUD6BQ8N6M0 293 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 C1orf131Q8NDD1 294 aaKnown RBP23.26■■□□□ 1.31
SH3D21-202ENST00000474766 CLMNQ96JQ2 1002 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 SEMA6BQ9H3T3 888 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 DNAJC18Q9H819 358 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 A0A1W2PQJ5 194 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 ZBTB5O15062 677 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 KIF1CO43896 1103 aaKnown RBP23.26■■□□□ 1.31
SH3D21-202ENST00000474766 TACC1O75410 805 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 HOXA7P31268 230 aaPredicted RBP23.26■■□□□ 1.31
SH3D21-202ENST00000474766 TMEM119Q4V9L6 283 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 RGMBQ6NW40 437 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 CAPNS2Q96L46 248 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 CCDC17Q96LX7 622 aa23.26■■□□□ 1.31
SH3D21-202ENST00000474766 RCCD1A6NED2 376 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 FAM196BA6NMK8 535 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 PES1O00541 588 aaKnown RBP23.25■■□□□ 1.31
SH3D21-202ENST00000474766 USO1O60763 962 aaKnown RBP23.25■■□□□ 1.31
SH3D21-202ENST00000474766 IREB2P48200 963 aaKnown RBP23.25■■□□□ 1.31
SH3D21-202ENST00000474766 MAP3K10Q02779 954 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 TBC1D8BQ0IIM8 1120 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 GRM1Q13255 1194 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 KDM7AQ6ZMT4 941 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 CCDC155Q8N6L0 562 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 SPATA4Q8NEY3 305 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.25■■□□□ 1.31
SH3D21-202ENST00000474766 RAD54LQ92698 747 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 CUL5Q93034 780 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 HOOK2Q96ED9 719 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 ERGIC2Q96RQ1 377 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 CAPN7Q9Y6W3 813 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 MRPL12P52815 198 aaKnown RBP23.25■■□□□ 1.31
SH3D21-202ENST00000474766 PLCB4Q15147 1175 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 TTMPQ5BVD1 217 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 DCAF15Q66K64 600 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 CDK5RAP3Q96JB5 506 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 STIM2Q9P246 746 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 MYH4Q9Y623 1939 aa23.25■■□□□ 1.31
SH3D21-202ENST00000474766 THSD7BQ9C0I4 1608 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 POTEMA6NI47 508 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 PSEN1P49768 467 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 ZNF157P51786 506 aaPredicted RBP23.24■■□□□ 1.31
SH3D21-202ENST00000474766 EHHADHQ08426 723 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 UBE2SQ16763 222 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 KRT79Q5XKE5 535 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 HPS3Q969F9 1004 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 LRRC1Q9BTT6 524 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 SLC39A2Q9NP94 309 aa23.24■■□□□ 1.31
SH3D21-202ENST00000474766 FAM155AB1AL88 458 aaPredicted RBP23.23■■□□□ 1.31
SH3D21-202ENST00000474766 USP17L10C9JJH3 530 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 CCDC172P0C7W6 258 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 SPA17Q15506 151 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 GUF1Q8N442 669 aaKnown RBP23.23■■□□□ 1.31
SH3D21-202ENST00000474766 HAS1Q92839 578 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 EEF2KMTQ96G04 330 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 WRNIP1Q96S55 665 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 NUDT12Q9BQG2 462 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 ZNF341Q9BYN7 854 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 LRRC27Q9C0I9 530 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 DONSONQ9NYP3 566 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 DMGDHQ9UI17 866 aaKnown RBP23.23■■□□□ 1.31
SH3D21-202ENST00000474766 TFR2Q9UP52 801 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 GCFC2P16383 781 aaKnown RBP23.23■■□□□ 1.31
SH3D21-202ENST00000474766 SLC16A2P36021 539 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 MTIF2P46199 727 aaKnown RBP23.23■■□□□ 1.31
SH3D21-202ENST00000474766 RASAL3Q86YV0 1011 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 CD302Q8IX05 232 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 SNX29Q8TEQ0 813 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 MKL1Q969V6 931 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 NOC4LQ9BVI4 516 aaKnown RBP23.23■■□□□ 1.31
SH3D21-202ENST00000474766 EPN3Q9H201 632 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 AGPAT5Q9NUQ2 364 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 HYOU1Q9Y4L1 999 aa23.23■■□□□ 1.31
SH3D21-202ENST00000474766 TBC1D12O60347 775 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 TRIM21P19474 475 aaKnown RBP23.22■■□□□ 1.31
SH3D21-202ENST00000474766 HNRNPH3P31942 346 aaKnown RBP23.22■■□□□ 1.31
SH3D21-202ENST00000474766 DRP2Q13474 957 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 VGLL4Q14135 290 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 CCDC96Q2M329 555 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 FOXR2Q6PJQ5 311 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 KCTD1Q719H9 257 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 PSTPIP2Q9H939 334 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 DDX25Q9UHL0 483 aaKnown RBP23.22■■□□□ 1.31
SH3D21-202ENST00000474766 ABCB11O95342 1321 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 MYH7BA7E2Y1 1941 aa23.22■■□□□ 1.31
SH3D21-202ENST00000474766 MPHOSPH10O00566 681 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms