RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ATG7O95352 703 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 ARIH2O95376 493 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 PSAPP07602 524 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 CYP11B2P19099 503 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 PSMC5P62195 406 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 UVSSAQ2YD98 709 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 KMT5BQ4FZB7 885 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 ABHD15Q6UXT9 468 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 C4orf19Q8IY42 314 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 CCDC47Q96A33 483 aaKnown RBP22.69■■□□□ 1.22
CDHR3-210ENST00000474330 TINF2Q9BSI4 451 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 BHMT2Q9H2M3 363 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 DACH1Q9UI36 760 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 SYNGAP1Q96PV0 1343 aa22.69■■□□□ 1.22
CDHR3-210ENST00000474330 SNAI1O95863 264 aaPredicted RBP22.68■■□□□ 1.22
CDHR3-210ENST00000474330 XRCC6P12956 609 aaKnown RBP eCLIP22.68■■□□□ 1.22
CDHR3-210ENST00000474330 CYP2B6P20813 491 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 IQCB1Q15051 598 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 LY6KQ17RY6 165 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 ZNF658Q5TYW1 1059 aaPredicted RBP22.68■■□□□ 1.22
CDHR3-210ENST00000474330 TAPT1Q6NXT6 567 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 MIS18BP1Q6P0N0 1132 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 METTL7BQ6UX53 244 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 UNC13DQ70J99 1090 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 GPBP1Q86WP2 473 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 PIGOQ8TEQ8 1089 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 SCFD2Q8WU76 684 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 DNAJC19Q96DA6 116 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 TMEM106CQ9BVX2 250 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 KATNBL1Q9H079 304 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 RBM47A0AV96 593 aaKnown RBP22.68■■□□□ 1.22
CDHR3-210ENST00000474330 GGPS1O95749 300 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 INHAP05111 366 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 CCL5P13501 91 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 TTLL4Q14679 1199 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 CT47A1Q5JQC4 288 aaPredicted RBP22.68■■□□□ 1.22
CDHR3-210ENST00000474330 DYMQ7RTS9 669 aa22.68■■□□□ 1.22
CDHR3-210ENST00000474330 DKC1O60832 514 aaKnown RBP eCLIP22.67■■□□□ 1.22
CDHR3-210ENST00000474330 UGCGQ16739 394 aa22.67■■□□□ 1.22
CDHR3-210ENST00000474330 ARSHQ5FYA8 562 aa22.67■■□□□ 1.22
CDHR3-210ENST00000474330 LUZP1Q86V48 1076 aa22.67■■□□□ 1.22
CDHR3-210ENST00000474330 GTPBP4Q9BZE4 634 aaKnown RBP22.67■■□□□ 1.22
CDHR3-210ENST00000474330 MLXIPQ9HAP2 919 aa22.67■■□□□ 1.22
CDHR3-210ENST00000474330 PDGFCQ9NRA1 345 aa22.67■■□□□ 1.22
CDHR3-210ENST00000474330 TELO2Q9Y4R8 837 aa22.67■■□□□ 1.22
CDHR3-210ENST00000474330 MYH9P35579 1960 aaKnown RBP22.67■■□□□ 1.22
CDHR3-210ENST00000474330 ZBTB39O15060 712 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 SUPT20HL2P0C7V6 817 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 TXNP10599 105 aaKnown RBP22.66■■□□□ 1.22
CDHR3-210ENST00000474330 XRCC5P13010 732 aaKnown RBP22.66■■□□□ 1.22
CDHR3-210ENST00000474330 SP4Q02446 784 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 TRIM32Q13049 653 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 CELF3Q5SZQ8 465 aaKnown RBP22.66■■□□□ 1.22
CDHR3-210ENST00000474330 OLFML2BQ68BL8 750 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 TRIB2Q92519 343 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 ATP6V0A1Q93050 837 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 UNC93B1Q9H1C4 597 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 ABHD16BQ9H3Z7 469 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 EXOC1Q9NV70 894 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 GABBR1Q9UBS5 961 aa22.66■■□□□ 1.22
CDHR3-210ENST00000474330 DBR1Q9UK59 544 aaKnown RBP22.66■■□□□ 1.22
CDHR3-210ENST00000474330 SORBS3O60504 671 aa22.65■■□□□ 1.22
CDHR3-210ENST00000474330 RINT1Q6NUQ1 792 aa22.65■■□□□ 1.22
CDHR3-210ENST00000474330 SWSAP1Q6NVH7 229 aa22.65■■□□□ 1.22
CDHR3-210ENST00000474330 KCND2Q9NZV8 630 aa22.65■■□□□ 1.22
CDHR3-210ENST00000474330 IGKV6D-21A0A0A0MT36 114 aa22.64■■□□□ 1.22
CDHR3-210ENST00000474330 GSTTP1A0A1W2PQM5 241 aa22.64■■□□□ 1.22
CDHR3-210ENST00000474330 YWHABP31946 246 aaKnown RBP22.64■■□□□ 1.22
CDHR3-210ENST00000474330 EHHADHQ08426 723 aa22.64■■□□□ 1.22
CDHR3-210ENST00000474330 CCDC60Q8IWA6 550 aaPredicted RBP22.64■■□□□ 1.22
CDHR3-210ENST00000474330 DHX40Q8IX18 779 aaKnown RBP22.64■■□□□ 1.22
CDHR3-210ENST00000474330 DHX37Q8IY37 1157 aaKnown RBP22.64■■□□□ 1.22
CDHR3-210ENST00000474330 SEPT1Q8WYJ6 367 aa22.64■■□□□ 1.22
CDHR3-210ENST00000474330 RNF208Q9H0X6 261 aa22.64■■□□□ 1.22
CDHR3-210ENST00000474330 ANKEF1Q9NU02 776 aa22.64■■□□□ 1.22
CDHR3-210ENST00000474330 FLRT1Q9NZU1 646 aa22.64■■□□□ 1.22
CDHR3-210ENST00000474330 PPP1R3GB7ZBB8 358 aa22.64■■□□□ 1.21
CDHR3-210ENST00000474330 IDEP14735 1019 aa22.64■■□□□ 1.21
CDHR3-210ENST00000474330 ERCC5P28715 1186 aaPredicted RBP22.64■■□□□ 1.21
CDHR3-210ENST00000474330 PSMD2Q13200 908 aa22.64■■□□□ 1.21
CDHR3-210ENST00000474330 GIT2Q14161 759 aa22.64■■□□□ 1.21
CDHR3-210ENST00000474330 CCL14Q16627 93 aa22.64■■□□□ 1.21
CDHR3-210ENST00000474330 C1orf186Q6ZWK4 172 aa22.64■■□□□ 1.21
CDHR3-210ENST00000474330 IGSF9BQ9UPX0 1349 aa22.64■■□□□ 1.21
CDHR3-210ENST00000474330 FRMD3A2A2Y4 597 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 ARHGEF35A5YM69 484 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 BECN2A8MW95 431 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 IKBKBO14920 756 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 KRT18P05783 430 aaKnown RBP22.63■■□□□ 1.21
CDHR3-210ENST00000474330 GJB1P08034 283 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 CD44P16070 742 aaKnown RBP22.63■■□□□ 1.21
CDHR3-210ENST00000474330 RARRES1P49788 294 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 ACVR2BQ13705 512 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 CCDC65Q8IXS2 484 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 SMYD4Q8IYR2 804 aaPredicted RBP22.63■■□□□ 1.21
CDHR3-210ENST00000474330 RUSC1Q9BVN2 902 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 PANK4Q9NVE7 773 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 GDAQ9Y2T3 454 aa22.63■■□□□ 1.21
CDHR3-210ENST00000474330 MAFBQ9Y5Q3 323 aaPredicted RBP22.63■■□□□ 1.21
CDHR3-210ENST00000474330 NPHP3-ACAD11A0A0J9YXS1 232 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms