RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ZNF484Q5JVG2 852 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 MYOCDQ8IZQ8 938 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 UIMC1Q96RL1 719 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 RIT2Q99578 217 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 IFIH1Q9BYX4 1025 aaKnown RBP21.05■□□□□ 0.96
CCDC171-206ENST00000474193 FAM49AQ9H0Q0 323 aaPredicted RBP21.05■□□□□ 0.96
CCDC171-206ENST00000474193 BRMS1Q9HCU9 246 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 INSL6Q9Y581 213 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.05■□□□□ 0.96
CCDC171-206ENST00000474193 PCDHA2Q9Y5H9 948 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 GBF1Q92538 1859 aa21.05■□□□□ 0.96
CCDC171-206ENST00000474193 WDR64B1ANS9 1081 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 ADAMTS3O15072 1205 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 GJB5O95377 273 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 DEFB103AP81534 67 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 MARCH8Q5T0T0 291 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 RUFY4Q6ZNE9 571 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 FAM184AQ8NB25 1140 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 NSUN7Q8NE18 718 aaKnown RBP21.04■□□□□ 0.96
CCDC171-206ENST00000474193 ATP8B4Q8TF62 1192 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 TEKT3Q9BXF9 490 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 CEP131Q9UPN4 1083 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 KIF3AQ9Y496 699 aa21.04■□□□□ 0.96
CCDC171-206ENST00000474193 COL1A2P08123 1366 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 CTDNEP1O95476 244 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 CHRNA1P02708 482 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 SFNP31947 248 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 MRPS6P82932 125 aaKnown RBP21.03■□□□□ 0.96
CCDC171-206ENST00000474193 LRCH2Q5VUJ6 765 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 FAM117BQ6P1L5 589 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.03■□□□□ 0.96
CCDC171-206ENST00000474193 USP38Q8NB14 1042 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 BBXQ8WY36 941 aaPredicted RBP21.03■□□□□ 0.96
CCDC171-206ENST00000474193 FAM167AQ96KS9 214 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 NAP1L4Q99733 375 aaKnown RBP21.03■□□□□ 0.96
CCDC171-206ENST00000474193 TSPYL2Q9H2G4 693 aaPredicted RBP21.03■□□□□ 0.96
CCDC171-206ENST00000474193 NRBP2Q9NSY0 501 aa21.03■□□□□ 0.96
CCDC171-206ENST00000474193 SMIM35A0A1B0GVV1 85 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 MARCH6O60337 910 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 HSP90AA1P07900 732 aaKnown RBP21.02■□□□□ 0.96
CCDC171-206ENST00000474193 KLRC1P26715 233 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 JAK3P52333 1124 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 TRIM29Q14134 588 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 Q4G0T1 1027 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 MTHFD1LQ6UB35 978 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 MOXD1Q6UVY6 613 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 CCDC60Q8IWA6 550 aaPredicted RBP21.02■□□□□ 0.96
CCDC171-206ENST00000474193 PPM1EQ8WY54 764 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 ARNTL2Q8WYA1 636 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 AIFM3Q96NN9 605 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 PHF20Q9BVI0 1012 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 DISC1Q9NRI5 854 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 GABBR1Q9UBS5 961 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 KCNJ14Q9UNX9 436 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 MAFBQ9Y5Q3 323 aaPredicted RBP21.02■□□□□ 0.96
CCDC171-206ENST00000474193 CDY2AQ9Y6F7 541 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 SQORQ9Y6N5 450 aa21.02■□□□□ 0.96
CCDC171-206ENST00000474193 CYP3A7-CYP3A51PA0A087WV96 503 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 MSH4O15457 936 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 JAK2O60674 1132 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 GHRP10912 638 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 CYP3A7P24462 503 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 TAP1Q03518 808 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 BECN1Q14457 450 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 ODR4Q5SWX8 454 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.01■□□□□ 0.95
CCDC171-206ENST00000474193 TRMT1LQ7Z2T5 733 aaKnown RBP21.01■□□□□ 0.95
CCDC171-206ENST00000474193 TRAPPC12Q8WVT3 735 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 CERS4Q9HA82 394 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 SMC3Q9UQE7 1217 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 TRPV2Q9Y5S1 764 aa21.01■□□□□ 0.95
CCDC171-206ENST00000474193 UPP2O95045 317 aa21■□□□□ 0.95
CCDC171-206ENST00000474193 ST3GAL1Q11201 340 aa21■□□□□ 0.95
CCDC171-206ENST00000474193 TCTN1Q2MV58 587 aa21■□□□□ 0.95
CCDC171-206ENST00000474193 LETM2Q2VYF4 491 aa21■□□□□ 0.95
CCDC171-206ENST00000474193 FAM43BQ6ZT52 329 aaPredicted RBP21■□□□□ 0.95
CCDC171-206ENST00000474193 RDM1Q8NG50 284 aa21■□□□□ 0.95
CCDC171-206ENST00000474193 SLC5A5Q92911 643 aa21■□□□□ 0.95
CCDC171-206ENST00000474193 DDX25Q9UHL0 483 aaKnown RBP21■□□□□ 0.95
CCDC171-206ENST00000474193 MYH9P35579 1960 aaKnown RBP20.99■□□□□ 0.95
CCDC171-206ENST00000474193 M0R2N6 131 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 MAGEB2O15479 319 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 CHMP2AO43633 222 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 GCFC2P16383 781 aaKnown RBP20.99■□□□□ 0.95
CCDC171-206ENST00000474193 TMOD1P28289 359 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 LPIN1Q14693 890 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 INF2Q27J81 1249 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 FBXO47Q5MNV8 452 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 TSHZ1Q6ZSZ6 1077 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 MIER3Q7Z3K6 550 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 TMCO2Q7Z6W1 182 aaPredicted RBP20.99■□□□□ 0.95
CCDC171-206ENST00000474193 TOP1MTQ969P6 601 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 LENG9Q96B70 501 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 TGS1Q96RS0 853 aaKnown RBP20.99■□□□□ 0.95
CCDC171-206ENST00000474193 YME1L1Q96TA2 773 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 FTHL17Q9BXU8 183 aa20.99■□□□□ 0.95
CCDC171-206ENST00000474193 CELF4Q9BZC1 486 aaKnown RBP20.99■□□□□ 0.95
CCDC171-206ENST00000474193 FDPSP14324 419 aaKnown RBP20.98■□□□□ 0.95
CCDC171-206ENST00000474193 KRT2P35908 639 aa20.98■□□□□ 0.95
CCDC171-206ENST00000474193 MGAT3Q09327 533 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms