RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 IARSP41252 1262 aaKnown RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 SMAD3P84022 425 aaKnown RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 GTF2H3Q13889 308 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 BRD3Q15059 726 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 SMAD2Q15796 467 aaKnown RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 INAVAQ3KP66 663 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 EMC4Q5J8M3 183 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 CREB3L3Q68CJ9 461 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 KCTD1Q719H9 257 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 GGNQ86UU5 652 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 NOSTRINQ8IVI9 506 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 CBARPQ8N350 705 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 PDZD8Q8NEN9 1154 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 TTC8Q8TAM2 541 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 PIP4K2CQ8TBX8 421 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 JMJD8Q96S16 334 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 ELF4Q99607 663 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 RTFDC1Q9BY42 306 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 RHOBTB2Q9BYZ6 727 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 ZDHHC5Q9C0B5 715 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 SMOC1Q9H4F8 434 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 CARS2Q9HA77 564 aaKnown RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 H2AFY2Q9P0M6 372 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 SLAMF8Q9P0V8 285 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 NOB1Q9ULX3 412 aaKnown RBP5.5□□□□□ -1.53
BRCA1-212ENST00000473961 B3GALT1Q9Y5Z6 326 aa5.5□□□□□ -1.53
BRCA1-212ENST00000473961 KLHL33A6NCF5 533 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 MAN2B1O00754 1011 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 ERC2O15083 957 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 TGM5O43548 720 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 XPOTO43592 962 aaKnown RBP5.49□□□□□ -1.53
BRCA1-212ENST00000473961 USP2O75604 605 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-212ENST00000473961 EIF3JO75822 258 aaKnown RBP5.49□□□□□ -1.53
BRCA1-212ENST00000473961 AMY2AP04746 511 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 PF4V1P10720 104 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 AMY2BP19961 511 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 SCAND1P57086 179 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 ZP2Q05996 745 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 BIRC2Q13490 618 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 EPHA7Q15375 998 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 CLUL1Q15846 466 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 HSF5Q4G112 596 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-212ENST00000473961 EFCAB2Q5VUJ9 269 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 SLC4A10Q6U841 1118 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-212ENST00000473961 C14orf80Q86SX3 495 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 CPA6Q8N4T0 437 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 NETO2Q8NC67 525 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 NUP43Q8NFH3 380 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 PLEKHO2Q8TD55 490 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 SEC14L1Q92503 715 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 IMPACTQ9P2X3 320 aa5.49□□□□□ -1.53
BRCA1-212ENST00000473961 NKRFO15226 690 aaKnown RBP eCLIP5.48□□□□□ -1.53
BRCA1-212ENST00000473961 NRDCO43847 1150 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 FOXD2O60548 495 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-212ENST00000473961 IL33O95760 270 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 ZGLP1P0C6A0 271 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 MTHFD2P13995 350 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 SDHAP31040 664 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 UBE4AQ14139 1066 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 TMEM132BQ14DG7 1078 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 TIGD7Q6NT04 549 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-212ENST00000473961 DGKHQ86XP1 1220 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 C7orf31Q8N865 590 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 DLG3Q92796 817 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 CLIP3Q96DZ5 547 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 HSPBAP1Q96EW2 488 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 AIFM3Q96NN9 605 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 MTA3Q9BTC8 594 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 G6PC3Q9BUM1 346 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 CSRNP2Q9H175 543 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 WNT8AQ9H1J5 351 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 MYOTQ9UBF9 498 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 RIPOR2Q9Y4F9 1068 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 PCDHB4Q9Y5E5 795 aa5.48□□□□□ -1.53
BRCA1-212ENST00000473961 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-212ENST00000473961 RBAK-RBAKDNI3L0D1 243 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 MAFGO15525 162 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 LTFP02788 710 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 NTRK1P04629 796 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 RAC2P15153 192 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 PRKCAP17252 672 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 EPHA5P54756 1037 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 CYP4F8P98187 520 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 ACAP2Q15057 778 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 BTBD8Q5XKL5 378 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 CPZQ66K79 652 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 BICRALQ6AI39 1079 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 SLC23A3Q6PIS1 610 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 ESPNLQ6ZVH7 1005 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 PHYKPLQ8IUZ5 450 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 LILRA2Q8N149 483 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 FBXO41Q8TF61 875 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 LMBR1Q8WVP7 490 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 PEX11GQ96HA9 241 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 MAML3Q96JK9 1138 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 VTA1Q9NP79 307 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 CD320Q9NPF0 282 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 NMRK2Q9NPI5 230 aa5.47□□□□□ -1.53
BRCA1-212ENST00000473961 TOPORSQ9NS56 1045 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms