RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PRPHP41219 470 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 ATP2C1P98194 919 aaPredicted RBP13.93□□□□□ -0.18
DDX56-209ENST00000473924 MDM2Q00987 491 aaPredicted RBP13.93□□□□□ -0.18
DDX56-209ENST00000473924 CYP4A11Q02928 519 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 SF3A1Q15459 793 aaKnown RBP13.93□□□□□ -0.18
DDX56-209ENST00000473924 XKR3Q5GH77 459 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 ZNF484Q5JVG2 852 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 FAM173BQ6P4H8 233 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 TPH2Q8IWU9 490 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 ERMNQ8TAM6 284 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 BADQ92934 168 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 DYDC2Q96IM9 177 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 EIF2AK1Q9BQI3 630 aaKnown RBP13.93□□□□□ -0.18
DDX56-209ENST00000473924 NOC4LQ9BVI4 516 aaKnown RBP13.93□□□□□ -0.18
DDX56-209ENST00000473924 RGL1Q9NZL6 768 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 PCDH10Q9P2E7 1040 aa13.93□□□□□ -0.18
DDX56-209ENST00000473924 SEPT9Q9UHD8 586 aaPredicted RBP13.93□□□□□ -0.18
DDX56-209ENST00000473924 DDX11L8A8MPP1 907 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 F13A1P00488 732 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 ITGB8P26012 769 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 CYP2C18P33260 490 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 MAGEA10P43363 369 aaPredicted RBP13.92□□□□□ -0.18
DDX56-209ENST00000473924 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.18
DDX56-209ENST00000473924 CCL23P55773 120 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 CEBPZQ03701 1054 aaKnown RBP13.92□□□□□ -0.18
DDX56-209ENST00000473924 CTTNQ14247 550 aaKnown RBP13.92□□□□□ -0.18
DDX56-209ENST00000473924 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 TRAPPC12Q8WVT3 735 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 ZNF396Q96N95 335 aaPredicted RBP13.92□□□□□ -0.18
DDX56-209ENST00000473924 CTAGE1Q96RT6 745 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 LXNQ9BS40 222 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 LRWD1Q9UFC0 647 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 COL1A2P08123 1366 aa13.92□□□□□ -0.18
DDX56-209ENST00000473924 UMODL1Q5DID0 1318 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 VWA3AA6NCI4 1184 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 SLC34A2O95436 690 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 KLRC1P26715 233 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 THPOP40225 353 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 ADAM17P78536 824 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 FPGSQ05932 587 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 PKP1Q13835 747 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 PDIA5Q14554 519 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 MARCH8Q5T0T0 291 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 PRPF38BQ5VTL8 546 aaKnown RBP13.91□□□□□ -0.18
DDX56-209ENST00000473924 ARL6IP4Q66PJ3 421 aaKnown RBP13.91□□□□□ -0.18
DDX56-209ENST00000473924 HAUS3Q68CZ6 603 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 MFSD5Q6N075 450 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 TAF2Q6P1X5 1199 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 OTUD6AQ7L8S5 288 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 RSPH3Q86UC2 560 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 CLIC4Q9Y696 253 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 STK24Q9Y6E0 443 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 WDR81Q562E7 1941 aa13.91□□□□□ -0.18
DDX56-209ENST00000473924 TRIP12Q14669 1992 aaPredicted RBP13.91□□□□□ -0.18
DDX56-209ENST00000473924 MBLAC1A4D2B0 266 aaPredicted RBP13.9□□□□□ -0.18
DDX56-209ENST00000473924 SLITRK3O94933 977 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 CKBP12277 381 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 FOXD4L6Q3SYB3 417 aaPredicted RBP13.9□□□□□ -0.18
DDX56-209ENST00000473924 MTERF2Q49AM1 385 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 FOXD4L3Q6VB84 417 aaPredicted RBP13.9□□□□□ -0.18
DDX56-209ENST00000473924 RUFY4Q6ZNE9 571 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 C4orf19Q8IY42 314 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 IGSF22Q8N9C0 903 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 DHX38Q92620 1227 aaKnown RBP13.9□□□□□ -0.18
DDX56-209ENST00000473924 ZBTB10Q96DT7 871 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 SCLYQ96I15 445 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
DDX56-209ENST00000473924 HSD17B14Q9BPX1 270 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 FTOQ9C0B1 505 aaKnown RBP eCLIP13.9□□□□□ -0.18
DDX56-209ENST00000473924 WRAP73Q9P2S5 460 aaPredicted RBP13.9□□□□□ -0.18
DDX56-209ENST00000473924 LTBP2Q14767 1821 aa13.9□□□□□ -0.18
DDX56-209ENST00000473924 TMEM150BA6NC51 233 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 ZBTB42B2RXF5 422 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 MAGEB2O15479 319 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 RPLP2P05387 115 aaKnown RBP13.89□□□□□ -0.19
DDX56-209ENST00000473924 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 CSF2RAP15509 400 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 SELPP16109 830 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 YWHABP31946 246 aaKnown RBP13.89□□□□□ -0.19
DDX56-209ENST00000473924 CCT6AP40227 531 aaKnown RBP13.89□□□□□ -0.19
DDX56-209ENST00000473924 TBC1D8BQ0IIM8 1120 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 PPIGQ13427 754 aaKnown RBP eCLIP13.89□□□□□ -0.198e-8■□□□□ 10.5
DDX56-209ENST00000473924 IL17AQ16552 155 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 KRT79Q5XKE5 535 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 PLA2G4FQ68DD2 849 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 ANO5Q75V66 913 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 LRRC8DQ7L1W4 858 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 CATSPER3Q86XQ3 398 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 METTL13Q8N6R0 699 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 SNX29Q8TEQ0 813 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 DNAJB3Q8WWF6 145 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 WNT8BQ93098 351 aa13.89□□□□□ -0.19
DDX56-209ENST00000473924 CEP170P1Q96L14 293 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms