RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 TNPO1Q92973 898 aaKnown RBP13.59□□□□□ -0.23
SMPD4-217ENST00000473720 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 PPP1R16BQ96T49 567 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
SMPD4-217ENST00000473720 ZNF577Q9BSK1 485 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 AGO3Q9H9G7 860 aaKnown RBP13.59□□□□□ -0.23
SMPD4-217ENST00000473720 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
SMPD4-217ENST00000473720 TRPV2Q9Y5S1 764 aa13.59□□□□□ -0.23
SMPD4-217ENST00000473720 IPO5O00410 1097 aaKnown RBP13.58□□□□□ -0.24
SMPD4-217ENST00000473720 CCNE2O96020 404 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 KLRC1P26715 233 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 PSMA5P28066 241 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 RCAN1P53805 252 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 PKN1Q16512 942 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 PTPROQ16827 1216 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 FAM160B1Q5W0V3 765 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 SWSAP1Q6NVH7 229 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 PDXDC2PQ6P474 469 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 MTHFD1LQ6UB35 978 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-217ENST00000473720 REXO1Q8N1G1 1221 aaKnown RBP13.58□□□□□ -0.24
SMPD4-217ENST00000473720 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-217ENST00000473720 KCNB2Q92953 911 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 SAMD11Q96NU1 681 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 ZMYND12Q9H0C1 365 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 VPS54Q9P1Q0 977 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 SAMM50Q9Y512 469 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 ADGRA3Q8IWK6 1321 aa13.58□□□□□ -0.24
SMPD4-217ENST00000473720 TTC28Q96AY4 2481 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 COL4A6Q14031 1691 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 H3BNC9 293 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 PRPF3O43395 683 aaKnown RBP13.57□□□□□ -0.24
SMPD4-217ENST00000473720 ATG7O95352 703 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 KCNA5P22460 613 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 GNA11P29992 359 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
SMPD4-217ENST00000473720 PAK2Q13177 524 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 STK3Q13188 491 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 BTG3Q14201 252 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-217ENST00000473720 TMEM266Q2M3C6 531 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 PAN2Q504Q3 1202 aaKnown RBP13.57□□□□□ -0.24
SMPD4-217ENST00000473720 PRR16Q569H4 304 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 MIS18BP1Q6P0N0 1132 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 ABHD15Q6UXT9 468 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 NIPA1Q7RTP0 329 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 MRPL38Q96DV4 380 aaKnown RBP13.57□□□□□ -0.24
SMPD4-217ENST00000473720 CELF4Q9BZC1 486 aaKnown RBP13.57□□□□□ -0.24
SMPD4-217ENST00000473720 UBE2ZQ9H832 354 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-217ENST00000473720 PCDHA2Q9Y5H9 948 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 MUC3AQ02505 3323 aa13.57□□□□□ -0.24
SMPD4-217ENST00000473720 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
SMPD4-217ENST00000473720 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
SMPD4-217ENST00000473720 HBP1O60381 514 aa13.56□□□□□ -0.24
SMPD4-217ENST00000473720 KRT76Q01546 638 aa13.56□□□□□ -0.24
SMPD4-217ENST00000473720 TCEAL5Q5H9L2 206 aa13.56□□□□□ -0.24
SMPD4-217ENST00000473720 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
SMPD4-217ENST00000473720 LINC01599Q8WXQ3 324 aa13.56□□□□□ -0.24
SMPD4-217ENST00000473720 PADI3Q9ULW8 664 aa13.56□□□□□ -0.24
SMPD4-217ENST00000473720 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 SMIM35A0A1B0GVV1 85 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 DHX15O43143 795 aaKnown RBP13.55□□□□□ -0.24
SMPD4-217ENST00000473720 RPLP2P05387 115 aaKnown RBP13.55□□□□□ -0.24
SMPD4-217ENST00000473720 CYP3A4P08684 503 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 COL9A1P20849 921 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 PDIA3P30101 505 aaKnown RBP13.55□□□□□ -0.24
SMPD4-217ENST00000473720 SLC26A2P50443 739 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 NLRP5P59047 1200 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 SETQ01105 290 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-217ENST00000473720 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
SMPD4-217ENST00000473720 TOB2Q14106 344 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-217ENST00000473720 NTRK3Q16288 839 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 TIGD5Q53EQ6 642 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 RUFY3Q7L099 469 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 RTN4RL1Q86UN2 441 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-217ENST00000473720 TEX2Q8IWB9 1127 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 METTL13Q8N6R0 699 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 CCDC148Q8NFR7 591 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 BICD2Q8TD16 824 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 ATP8B4Q8TF62 1192 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 RNF26Q9BY78 433 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-217ENST00000473720 CDHR5Q9HBB8 845 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 GABBR1Q9UBS5 961 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 RAPGEFL1Q9UHV5 662 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 LRFN2Q9ULH4 789 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 NID2Q14112 1375 aa13.55□□□□□ -0.24
SMPD4-217ENST00000473720 H3BQ06 376 aaPredicted RBP13.54□□□□□ -0.24
SMPD4-217ENST00000473720 CPLX1O14810 134 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 GRM6O15303 877 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 CHMP2AO43633 222 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 DGKIO75912 1065 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 VTNP04004 478 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 NEFLP07196 543 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 PSAPP07602 524 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 IFNAR1P17181 557 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 ATP4AP20648 1035 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 BMPR1AP36894 532 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 GATMP50440 423 aa13.54□□□□□ -0.24
SMPD4-217ENST00000473720 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms