RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 ERAP1Q9NZ08 941 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 PKD2L1Q9P0L9 805 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 INSL6Q9Y581 213 aa14.72□□□□□ -0.05
SHROOM3-204ENST00000473602 GRXCR2A6NFK2 248 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 LGR5O75473 907 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 ALADP13716 330 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 USP11P51784 963 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 ZNF200P98182 395 aaPredicted RBP14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 ITGB3BPQ13352 177 aaPredicted RBP14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 MBTPS1Q14703 1052 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 ME3Q16798 604 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 ZNF618Q5T7W0 954 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 UTP14CQ5TAP6 766 aaKnown RBP14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 TRAF7Q6Q0C0 670 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 SERINC5Q86VE9 423 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 BLIDQ8IZY5 108 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 FBXO22Q8NEZ5 403 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 RASGRP4Q8TDF6 673 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 ATP6V0A1Q93050 837 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 WNT8BQ93098 351 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 GTF3C6Q969F1 213 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 RNPEPQ9H4A4 650 aa14.71□□□□□ -0.05
SHROOM3-204ENST00000473602 MYH9P35579 1960 aaKnown RBP14.71□□□□□ -0.06
SHROOM3-204ENST00000473602 NRCAMQ92823 1304 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 H3BQ06 376 aaPredicted RBP14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 IPO5O00410 1097 aaKnown RBP14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 ADAMTS3O15072 1205 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 CAND2O75155 1236 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 ACTR2P61160 394 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 CSPP1Q1MSJ5 1256 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 TRIM71Q2Q1W2 868 aaKnown RBP14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 GLG1Q92896 1179 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 TNPO1Q92973 898 aaKnown RBP14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 AZI2Q9H6S1 392 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 TBC1D22BQ9NU19 505 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 TELO2Q9Y4R8 837 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 WDR81Q562E7 1941 aa14.7□□□□□ -0.06
SHROOM3-204ENST00000473602 M0R2N6 131 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 ATG7O95352 703 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 CTDNEP1O95476 244 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 RBM25P49756 843 aaKnown RBP14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 SLC26A2P50443 739 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 ADAM17P78536 824 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 HIC1Q14526 733 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 NPY5RQ15761 445 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 PUS10Q3MIT2 529 aaKnown RBP14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 MOXD1Q6UVY6 613 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 PLPPR4Q7Z2D5 763 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 MYOCDQ8IZQ8 938 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 DBF4BQ8NFT6 615 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 NEK9Q8TD19 979 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 LMBR1Q8WVP7 490 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 MRPL38Q96DV4 380 aaKnown RBP14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 AIFM3Q96NN9 605 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 ZNF577Q9BSK1 485 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 PHF20Q9BVI0 1012 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 ORC3Q9UBD5 711 aaPredicted RBP14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 TCEAL9Q9UHQ7 104 aa14.69□□□□□ -0.06
SHROOM3-204ENST00000473602 WDFY4Q6ZS81 3184 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 TREHO43280 583 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 AMHP03971 560 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 RPLP2P05387 115 aaKnown RBP14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 MRE11P49959 708 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 HTRA4P83105 476 aaPredicted RBP14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 PTPROQ16827 1216 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 EPC2Q52LR7 807 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 PRR16Q569H4 304 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 ZNF746Q6NUN9 644 aaPredicted RBP14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 TAF2Q6P1X5 1199 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 KRT25Q7Z3Z0 450 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 SMAP1Q8IYB5 467 aaPredicted RBP14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 TBCKQ8TEA7 893 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 LENG9Q96B70 501 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 SETD4Q9NVD3 440 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 LIMCH1Q9UPQ0 1083 aa14.68□□□□□ -0.06
SHROOM3-204ENST00000473602 PTPRSQ13332 1948 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 IGKV6D-21A0A0A0MT36 114 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 POTEB3A0JP26 581 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 RSPH10B2B2RC85 870 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 DHX15O43143 795 aaKnown RBP14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 DCXO43602 365 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 LARGE1O95461 756 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 CCNE2O96020 404 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 RSPH10BP0C881 870 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 MARK3P27448 753 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 THPOP40225 353 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 STAT5BP51692 787 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 KRT76Q01546 638 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 PPFIA1Q13136 1202 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 NONOQ15233 471 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 FAM160B1Q5W0V3 765 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 MIS18BP1Q6P0N0 1132 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 POTEBQ6S5H4 581 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 EP400NLQ6ZTU2 488 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 RPAINQ86UA6 219 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 NECAB1Q8N987 351 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 BANK1Q8NDB2 785 aa14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 NSUN7Q8NE18 718 aaKnown RBP14.67□□□□□ -0.06
SHROOM3-204ENST00000473602 SP7Q8TDD2 431 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms