RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 KRT40Q6A162 431 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 RPAINQ86UA6 219 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 FAM184AQ8NB25 1140 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 TBCKQ8TEA7 893 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 GLG1Q92896 1179 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 PCYT2Q99447 389 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 RAD9AQ99638 391 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 SDF4Q9BRK5 362 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 AGO4Q9HCK5 861 aaKnown RBP20.47■□□□□ 0.87
SNX4-204ENST00000473417 TUBE1Q9UJT0 475 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 MTCH2Q9Y6C9 303 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 MUC3AQ02505 3323 aa20.47■□□□□ 0.87
SNX4-204ENST00000473417 EVPLQ92817 2033 aa20.46■□□□□ 0.87
SNX4-204ENST00000473417 MBLAC1A4D2B0 266 aaPredicted RBP20.46■□□□□ 0.87
SNX4-204ENST00000473417 MEIS1O00470 390 aa20.46■□□□□ 0.87
SNX4-204ENST00000473417 TAF2Q6P1X5 1199 aa20.46■□□□□ 0.87
SNX4-204ENST00000473417 RUFY4Q6ZNE9 571 aa20.46■□□□□ 0.87
SNX4-204ENST00000473417 NIPA1Q7RTP0 329 aa20.46■□□□□ 0.87
SNX4-204ENST00000473417 PLA2G4DQ86XP0 818 aa20.46■□□□□ 0.87
SNX4-204ENST00000473417 SEPT8Q92599 483 aa20.46■□□□□ 0.87
SNX4-204ENST00000473417 ATG2AQ2TAZ0 1938 aa20.46■□□□□ 0.87
SNX4-204ENST00000473417 CCDC194A0A1B0GVG4 234 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 EDIL3O43854 480 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 AMHP03971 560 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 KRT2P35908 639 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 ACTR2P61160 394 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 GUCY1B3Q02153 619 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 MGAT3Q09327 533 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 NONOQ15233 471 aaKnown RBP eCLIP20.45■□□□□ 0.86
SNX4-204ENST00000473417 MARCH8Q5T0T0 291 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 KRT25Q7Z3Z0 450 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 MICALL1Q8N3F8 863 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 C8orf76Q96K31 380 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 UIMC1Q96RL1 719 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 BRMS1Q9HCU9 246 aa20.45■□□□□ 0.86
SNX4-204ENST00000473417 KIAA1671Q9BY89 1806 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 IGLV3-22A0A075B6J6 115 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 LINC01553A4QN01 128 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 GTPBP6O43824 516 aaPredicted RBP20.44■□□□□ 0.86
SNX4-204ENST00000473417 CHRNA1P02708 482 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 MMP1P03956 469 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 USP11P51784 963 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 HTRA4P83105 476 aaPredicted RBP20.44■□□□□ 0.86
SNX4-204ENST00000473417 NR5A1Q13285 461 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 INF2Q27J81 1249 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 PRR16Q569H4 304 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 FAM117BQ6P1L5 589 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 PIK3AP1Q6ZUJ8 805 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 MYOCDQ8IZQ8 938 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 APBB2Q92870 758 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 TSPYL2Q9H2G4 693 aaPredicted RBP20.44■□□□□ 0.86
SNX4-204ENST00000473417 AZI2Q9H6S1 392 aa20.44■□□□□ 0.86
SNX4-204ENST00000473417 NCOR1O75376 2440 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 TTC3P53804 2025 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 BTBD18B2RXH4 712 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 LPXNO60711 386 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 ATG7O95352 703 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 CIITAP33076 1130 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 ERVK-21P61565 698 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 MRPS5P82675 430 aaKnown RBP20.43■□□□□ 0.86
SNX4-204ENST00000473417 GRB10Q13322 594 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 EARS2Q5JPH6 523 aaKnown RBP20.43■□□□□ 0.86
SNX4-204ENST00000473417 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
SNX4-204ENST00000473417 SP7Q8TDD2 431 aaPredicted RBP20.43■□□□□ 0.86
SNX4-204ENST00000473417 ASB2Q96Q27 587 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 IFIH1Q9BYX4 1025 aaKnown RBP20.43■□□□□ 0.86
SNX4-204ENST00000473417 INSL6Q9Y581 213 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 BDP1A6H8Y1 2624 aa20.43■□□□□ 0.86
SNX4-204ENST00000473417 TCF20Q9UGU0 1960 aaKnown RBP20.43■□□□□ 0.86
SNX4-204ENST00000473417 IGKV6D-21A0A0A0MT36 114 aa20.42■□□□□ 0.86
SNX4-204ENST00000473417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.42■□□□□ 0.86
SNX4-204ENST00000473417 RRN3P2A6NIE6 340 aa20.42■□□□□ 0.86
SNX4-204ENST00000473417 INSRRP14616 1297 aa20.42■□□□□ 0.86
SNX4-204ENST00000473417 IGBP1P78318 339 aa20.42■□□□□ 0.86
SNX4-204ENST00000473417 PLPPR4Q7Z2D5 763 aa20.42■□□□□ 0.86
SNX4-204ENST00000473417 RSPH3Q86UC2 560 aa20.42■□□□□ 0.86
SNX4-204ENST00000473417 DNAJB3Q8WWF6 145 aa20.42■□□□□ 0.86
SNX4-204ENST00000473417 TGS1Q96RS0 853 aaKnown RBP20.42■□□□□ 0.86
SNX4-204ENST00000473417 FAM205CA6NFA0 338 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 TDP2O95551 362 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 CCNE2O96020 404 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 RPLP2P05387 115 aaKnown RBP20.41■□□□□ 0.86
SNX4-204ENST00000473417 STAT5BP51692 787 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 SETQ01105 290 aaPredicted RBP20.41■□□□□ 0.86
SNX4-204ENST00000473417 PLCB4Q15147 1175 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 SAFBQ15424 915 aaKnown RBP eCLIP20.41■□□□□ 0.86
SNX4-204ENST00000473417 GDPD5Q8WTR4 605 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 TNPO1Q92973 898 aaKnown RBP20.41■□□□□ 0.86
SNX4-204ENST00000473417 TNFRSF25Q93038 417 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 TOP1MTQ969P6 601 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 ZNF577Q9BSK1 485 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 TRPC6Q9Y210 931 aa20.41■□□□□ 0.86
SNX4-204ENST00000473417 DDX39AO00148 427 aaKnown RBP20.4■□□□□ 0.86
SNX4-204ENST00000473417 DHX15O43143 795 aaKnown RBP20.4■□□□□ 0.86
SNX4-204ENST00000473417 GHRP10912 638 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 GJB2P29033 226 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 SLC26A2P50443 739 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 LPIN1Q14693 890 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 LETM2Q2VYF4 491 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 ABHD15Q6UXT9 468 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms