RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ARHGAP5Q13017 1502 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 CDC42BPBQ9Y5S2 1711 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 ITSN2Q9NZM3 1697 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 MLH3Q9UHC1 1453 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 TRAV20A0A0B4J274 112 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 ERICH4A6NGS2 130 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 FZD9O00144 591 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 NAP1L1P55209 391 aaKnown RBP6.82□□□□□ -1.32
RTF1-203ENST00000473214 TMF1P82094 1093 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 IFIT5Q13325 482 aaKnown RBP6.82□□□□□ -1.32
RTF1-203ENST00000473214 PKN2Q16513 984 aaKnown RBP6.82□□□□□ -1.32
RTF1-203ENST00000473214 HECTD3Q5T447 861 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 CFAP58Q5T655 872 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 YOD1Q5VVQ6 348 aaPredicted RBP6.82□□□□□ -1.32
RTF1-203ENST00000473214 NUGGCQ68CJ6 796 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 KLHL10Q6JEL2 608 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 PLBD1Q6P4A8 553 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 XKR5Q6UX68 686 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 CCDC149Q6ZUS6 474 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 GPR155Q7Z3F1 870 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 SRGAP1Q7Z6B7 1085 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 MILR1Q7Z6M3 343 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 ARMC10Q8N2F6 343 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 C7orf31Q8N865 590 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 GALNT11Q8NCW6 608 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 SLC35G2Q8TBE7 412 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 BTN2A2Q8WVV5 523 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 GATAD2BQ8WXI9 593 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 USP13Q92995 863 aaPredicted RBP6.82□□□□□ -1.32
RTF1-203ENST00000473214 FAM193BQ96PV7 902 aaPredicted RBP6.82□□□□□ -1.32
RTF1-203ENST00000473214 ELAC1Q9H777 363 aaKnown RBP6.82□□□□□ -1.32
RTF1-203ENST00000473214 FAM204AQ9H8W3 233 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 VPS45Q9NRW7 570 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 ARGLU1Q9NWB6 273 aaPredicted RBP6.82□□□□□ -1.32
RTF1-203ENST00000473214 CEP72Q9P209 647 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 CDC23Q9UJX2 597 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 CNTLNQ9NXG0 1405 aa6.82□□□□□ -1.32
RTF1-203ENST00000473214 ABCC1P33527 1531 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 LRRC7Q96NW7 1537 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 RNF17Q9BXT8 1623 aaKnown RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 FSD2A1L4K1 749 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 B4DLN1 442 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 RASA4BC9J798 803 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 TM4SF5O14894 197 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 EREGO14944 169 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 DHX15O43143 795 aaKnown RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 RASA4O43374 803 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 HTATSF1O43719 755 aaKnown RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 ZBED1O96006 694 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 DNTTP04053 509 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 CYP11A1P05108 521 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 JMJD7P0C870 316 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 MUTP22033 750 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 GUCY2CP25092 1073 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 IL6STP40189 918 aaPredicted RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 STAT1P42224 750 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 SCNN1BP51168 640 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 CLNS1AP54105 237 aaKnown RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 HSD17B7P56937 341 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 UBASH3AP57075 661 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 IFT88Q13099 833 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 HSP90AA2PQ14568 343 aaPredicted RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 ODF1Q14990 250 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 PPP2R5BQ15173 497 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 LLGL1Q15334 1064 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 ZKSCAN8Q15776 578 aaPredicted RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 CFAP100Q494V2 611 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 CCDC38Q502W7 563 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 B3GNT9Q6UX72 402 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 UNC5DQ6UXZ4 953 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 PDZD4Q76G19 769 aaPredicted RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 BRAPQ7Z569 592 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 ZDHHC13Q8IUH4 622 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 RIPOR3Q96MK2 946 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 TAAR9Q96RI9 348 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 SDF4Q9BRK5 362 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 LSM14BQ9BX40 385 aaKnown RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 TRIM6Q9C030 488 aaPredicted RBP6.81□□□□□ -1.32
RTF1-203ENST00000473214 CEP44Q9C0F1 390 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 RNF38Q9H0F5 515 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 TRIM39Q9HCM9 518 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 ARHGEF4Q9NR80 690 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 NDOR1Q9UHB4 597 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 SRCAPQ6ZRS2 3230 aa6.81□□□□□ -1.32
RTF1-203ENST00000473214 A2ML1A8K2U0 1454 aa6.8□□□□□ -1.32
RTF1-203ENST00000473214 FOXN3O00409 490 aaPredicted RBP6.8□□□□□ -1.32
RTF1-203ENST00000473214 RTCAO00442 366 aaKnown RBP6.8□□□□□ -1.32
RTF1-203ENST00000473214 WISP1O95388 367 aa6.8□□□□□ -1.32
RTF1-203ENST00000473214 ECEL1O95672 775 aa6.8□□□□□ -1.32
RTF1-203ENST00000473214 DDX58O95786 925 aaKnown RBP6.8□□□□□ -1.32
RTF1-203ENST00000473214 ASLP04424 464 aa6.8□□□□□ -1.32
RTF1-203ENST00000473214 POLR2BP30876 1174 aaKnown RBP6.8□□□□□ -1.32
RTF1-203ENST00000473214 PPM1AP35813 382 aa6.8□□□□□ -1.32
RTF1-203ENST00000473214 PAPOLAP51003 745 aaKnown RBP6.8□□□□□ -1.32
RTF1-203ENST00000473214 SUMO1P63165 101 aaKnown RBP6.8□□□□□ -1.32
RTF1-203ENST00000473214 KLF1Q13351 362 aaPredicted RBP6.8□□□□□ -1.32
RTF1-203ENST00000473214 PPP2R5DQ14738 602 aa6.8□□□□□ -1.32
RTF1-203ENST00000473214 TRIP4Q15650 581 aaPredicted RBP6.8□□□□□ -1.32
RTF1-203ENST00000473214 INAVAQ3KP66 663 aa6.8□□□□□ -1.32
RTF1-203ENST00000473214 PDE12Q6L8Q7 609 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms