RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	MRPS6	P82932	125 aa	Known RBP	10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	MGAT3	Q09327	533 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	LPIN1	Q14693	890 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	PLCB4	Q15147	1175 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	MARCH8	Q5T0T0	291 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	IER5	Q5VY09	327 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	MIS18BP1	Q6P0N0	1132 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	POTEB	Q6S5H4	581 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	TSHZ1	Q6ZSZ6	1077 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	RUFY3	Q7L099	469 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	SAMD11	Q96NU1	681 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	UHRF1	Q96T88	793 aa	Predicted RBP	10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	ZNF577	Q9BSK1	485 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	OSBPL7	Q9BZF2	842 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	SUGCT	Q9HAC7	445 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	CYP46A1	Q9Y6A2	500 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	CDY2A	Q9Y6F7	541 aa		10.14	□□□□□ -0.79
CHEK2-223	ENST00000472807	IGLV3-22	A0A075B6J6	115 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	CPLX1	O14810	134 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	ATG7	O95352	703 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	CCNE2	O96020	404 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	IFNAR1	P17181	557 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	PDIA3	P30101	505 aa	Known RBP	10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	CCT2	P78371	535 aa	Known RBP	10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	TFF2	Q03403	129 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	PKN1	Q16512	942 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	PTPRO	Q16827	1216 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	PRR16	Q569H4	304 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	FBXO47	Q5MNV8	452 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	CKAP2L	Q8IYA6	745 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	TRIM22	Q8IYM9	498 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	ATP8B4	Q8TF62	1192 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	CRYGN	Q8WXF5	182 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	HLA-C	Q95604	372 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	ZBTB10	Q96DT7	871 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	C17orf80	Q9BSJ5	609 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	NCOA5	Q9HCD5	579 aa	Known RBP	10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	ZSWIM6	Q9HCJ5	1215 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	ZNF302	Q9NR11	478 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	TBC1D22B	Q9NU19	505 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	PCDHA2	Q9Y5H9	948 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	TRPV2	Q9Y5S1	764 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	NLRC5	Q86WI3	1866 aa		10.13	□□□□□ -0.79
CHEK2-223	ENST00000472807	MYH9	P35579	1960 aa	Known RBP	10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	IGKV6D-21	A0A0A0MT36	114 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	SMIM35	A0A1B0GVV1	85 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	HBP1	O60381	514 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	PPFIA3	O75145	1194 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	CD52	P31358	61 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	EVC	P57679	992 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	KRT76	Q01546	638 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	TMEM62	Q0P6H9	643 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	PAK2	Q13177	524 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	TOB2	Q14106	344 aa	Predicted RBP	10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	NTRK3	Q16288	839 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	EPC2	Q52LR7	807 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	PDXDC2P	Q6P474	469 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	CPLX2	Q6PUV4	134 aa	Known RBP	10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	MTHFD1L	Q6UB35	978 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	ABHD15	Q6UXT9	468 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	NME8	Q8N427	588 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	RASGRP4	Q8TDF6	673 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	TRAPPC12	Q8WVT3	735 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	IL17RA	Q96F46	866 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	FTHL17	Q9BXU8	183 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	SH3GLB2	Q9NR46	395 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	VPS54	Q9P1Q0	977 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	RWDD3	Q9Y3V2	267 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	SQOR	Q9Y6N5	450 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	RALGAPA2	Q2PPJ7	1873 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	TTC3	P53804	2025 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	COL1A2	P08123	1366 aa		10.12	□□□□□ -0.79
CHEK2-223	ENST00000472807	ADGRA3	Q8IWK6	1321 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	IGSF9B	Q9UPX0	1349 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	DHX15	O43143	795 aa	Known RBP	10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	PSAP	P07602	524 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	CIITA	P33076	1130 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	CTNNB1	P35222	781 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	KCNQ1	P51787	676 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	NLRP5	P59047	1200 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	SSRP1	Q08945	709 aa	Known RBP	10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	TIGD5	Q53EQ6	642 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	ZNF484	Q5JVG2	852 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	SWSAP1	Q6NVH7	229 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	TMEM192	Q8IY95	271 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	FIBCD1	Q8N539	461 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	MRPL38	Q96DV4	380 aa	Known RBP	10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	UIMC1	Q96RL1	719 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	CELF4	Q9BZC1	486 aa	Known RBP	10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	C22orf23	Q9BZE7	217 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	UPF3B	Q9BZI7	483 aa	Known RBP	10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	TM6SF1	Q9BZW5	370 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	SAMM50	Q9Y512	469 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	PCDHA10	Q9Y5I2	948 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	TCF20	Q9UGU0	1960 aa	Known RBP	10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	LOXHD1	Q8IVV2	1947 aa		10.11	□□□□□ -0.79
CHEK2-223	ENST00000472807	KDM3A	Q9Y4C1	1321 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 110 ms