RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 USP17L18D6R9N7 530 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L22D6RA61 530 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L17D6RBQ6 530 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L19D6RCP7 530 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L20D6RJB6 530 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 GCOM1H8Y6P7 765 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 MEIS2O14770 477 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 TRIM66O15016 1216 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 CALUO43852 315 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USO1O60763 962 aaKnown RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 COBLO75128 1261 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 TADA3O75528 432 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 F12P00748 615 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 SSBP05455 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 NR3C2P08235 984 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 POLR2MP0CAP2 368 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 GAP43P17677 238 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 RPA1P27694 616 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 BAG6P46379 1132 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 ERVK-24P63145 666 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 SETQ01105 290 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 MTF1Q14872 753 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 SPA17Q15506 151 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 WHAMMP3Q1A5X7 153 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 CCDC40Q4G0X9 1142 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 PRR16Q569H4 304 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 ZNF569Q5MCW4 686 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 USP17L6PQ6QN14 398 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 TMCO3Q6UWJ1 677 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 STXBP4Q6ZWJ1 553 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 KIAA1328Q86T90 577 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 GPBP1Q86WP2 473 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 SAMD3Q8N6K7 520 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 LRRC15Q8TF66 581 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 RABGGTAQ92696 567 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 PRMT6Q96LA8 375 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 CAMKK2Q96RR4 588 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 EIF3CQ99613 913 aaKnown RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 POLR3CQ9BUI4 534 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 CARD6Q9BX69 1037 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 NDST4Q9H3R1 872 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 SEMA6BQ9H3T3 888 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 MRPL44Q9H9J2 332 aaKnown RBP8.44□□□□□ -1.06
CCDC171-205ENST00000472806 CDC23Q9UJX2 597 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 PRR12Q9ULL5 1215 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 ZNRF3Q9ULT6 936 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 COL4A3BPQ9Y5P4 624 aa8.44□□□□□ -1.06
CCDC171-205ENST00000472806 FAM196BA6NMK8 535 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 TCP10L2B9ZVM9 353 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 CETN3O15182 167 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 SPTLC1O15269 473 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 EDIL3O43854 480 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 TBCAO75347 108 aaKnown RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 H2AFXP16104 143 aaPredicted RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 MCM3P25205 808 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 RPL13P26373 211 aaKnown RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 HNRNPH3P31942 346 aaKnown RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 EPS15P42566 896 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 CKAP4Q07065 602 aaKnown RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 TNFAIP1Q13829 316 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 TNIP1Q15025 636 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 EZH2Q15910 746 aaKnown RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 QPCTQ16769 361 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 ERCC6LQ2NKX8 1250 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 EDRF1Q3B7T1 1238 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 USH1GQ495M9 461 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 HERC4Q5GLZ8 1057 aaPredicted RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 NCAPH2Q6IBW4 605 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 IQCEQ6IPM2 695 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 KRT26Q7Z3Y9 468 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 SRGAP1Q7Z6B7 1085 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 SIAH1Q8IUQ4 282 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 NEK11Q8NG66 645 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 ETNPPLQ8TBG4 499 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 NEK9Q8TD19 979 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 CRYGNQ8WXF5 182 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 DNAJC19Q96DA6 116 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 ITPKCQ96DU7 683 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 RPGRIP1Q96KN7 1286 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 CCDC42Q96M95 316 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 WDR24Q96S15 920 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 SLF1Q9BQI6 1058 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 WDR11Q9BZH6 1224 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 TANGO6Q9C0B7 1094 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 TTYH3Q9C0H2 523 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 GBP3Q9H0R5 595 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 RANBP17Q9H2T7 1088 aaKnown RBP8.43□□□□□ -1.06
CCDC171-205ENST00000472806 VCPKMTQ9H867 229 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 TUFT1Q9NNX1 390 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 ZBTB21Q9ULJ3 1066 aa8.43□□□□□ -1.06
CCDC171-205ENST00000472806 SCN9AQ15858 1988 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 ANO9A1A5B4 782 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 FRMD3A2A2Y4 597 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 SPDYE5A6NIY4 337 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 YDJCA8MPS7 323 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 TRAF5O00463 557 aa8.42□□□□□ -1.06
CCDC171-205ENST00000472806 PSMD14O00487 310 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms