RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 SMC1AQ14683 1233 aaKnown RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 FBXO47Q5MNV8 452 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 PHLDB3Q6NSJ2 640 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 TAF2Q6P1X5 1199 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 POTEGQ6S5H5 508 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 FAM9BQ8IZU0 186 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 CLASRPQ8N2M8 674 aaKnown RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 TMEM87AQ8NBN3 555 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 RGS22Q8NE09 1264 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 LMBR1Q8WVP7 490 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 STRBPQ96SI9 672 aaKnown RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 EPC1Q9H2F5 836 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 SPATA6Q9NWH7 488 aaPredicted RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 IGSF9Q9P2J2 1179 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 FBXO4Q9UKT5 387 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 ZNF215Q9UL58 517 aaPredicted RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 PCDHB7Q9Y5E2 793 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.85□□□□□ -1.31
SIK3-208ENST00000472648 ITPR1Q14643 2758 aa6.85□□□□□ -1.31
SIK3-208ENST00000472648 COL4A3Q01955 1670 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 ABCB11O95342 1321 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 M0QZ92 97 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 IPO8O15397 1037 aaKnown RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 TBC1D4O60343 1298 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 SRFP11831 508 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 MYCLP12524 364 aaPredicted RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 TRIM27P14373 513 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 PLCB3Q01970 1234 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 KRT17Q04695 432 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 SPEM2Q0P670 501 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 PAK2Q13177 524 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 BMS1Q14692 1282 aaKnown RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 HSP90AB4PQ58FF6 505 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 UNQ6494/PRO21346Q6UXR6 183 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 MCF2L2Q86YR7 1114 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 C12orf76Q8N812 135 aaPredicted RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 PJA1Q8NG27 643 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 SYTL5Q8TDW5 730 aaPredicted RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 CLUAP1Q96AJ1 413 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 USP26Q9BXU7 913 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 MAF1Q9H063 256 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 BOLA2Q9H3K6 86 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 AGO3Q9H9G7 860 aaKnown RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 EPB41L4AQ9HCS5 686 aaPredicted RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 PARD6AQ9NPB6 346 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 PXMP2Q9NR77 195 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 ARHGEF3Q9NR81 526 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 DLGAP2Q9P1A6 1054 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 COL20A1Q9P218 1284 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 RAB23Q9ULC3 237 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 SUPT16HQ9Y5B9 1047 aaKnown RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 CDY2AQ9Y6F7 541 aa6.84□□□□□ -1.31
SIK3-208ENST00000472648 FLNBO75369 2602 aaKnown RBP6.84□□□□□ -1.31
SIK3-208ENST00000472648 DMXL2Q8TDJ6 3036 aa6.84□□□□□ -1.32
SIK3-208ENST00000472648 DOCK6Q96HP0 2047 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 IGF2RP11717 2491 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 NMT2O60551 498 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 CLASP2O75122 1294 aaKnown RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 ZIC2O95409 532 aaPredicted RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 RPLP2P05387 115 aaKnown RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 NR3C2P08235 984 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 GNAT2P19087 354 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 UBA1P22314 1058 aaKnown RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 TGM1P22735 817 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 PPM1AP35813 382 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 SARSP49591 514 aaKnown RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 ADAM17P78536 824 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 MRPS6P82932 125 aaKnown RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 CSTF1Q05048 431 aaKnown RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 N4BP2L1Q5TBK1 243 aaPredicted RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 IL31Q6EBC2 164 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 LRSAM1Q6UWE0 723 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 TMC5Q6UXY8 1006 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 RTN4RL1Q86UN2 441 aaPredicted RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 MAML2Q8IZL2 1156 aaPredicted RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 RHPN1Q8TCX5 695 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 DNAJB3Q8WWF6 145 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 FRAT1Q92837 279 aaPredicted RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 BCO2Q9BYV7 579 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 NACAP1Q9BZK3 213 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 FOXQ1Q9C009 403 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 IL17RBQ9NRM6 502 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 TYW1Q9NV66 732 aaKnown RBP6.83□□□□□ -1.32
SIK3-208ENST00000472648 ZSCAN32Q9NX65 697 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 HCSTQ9UBK5 93 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 TUBE1Q9UJT0 475 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 LHX6Q9UPM6 363 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 MAST4O15021 2626 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 AKAP13Q12802 2813 aa6.83□□□□□ -1.32
SIK3-208ENST00000472648 TICRRQ7Z2Z1 1910 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 C2orf71A6NGG8 1288 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 C1QTNF9BB2RNN3 333 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 GPAA1O43292 621 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 RANBP6O60518 1105 aaKnown RBP6.82□□□□□ -1.32
SIK3-208ENST00000472648 LRP3O75074 770 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 C1QTNF9P0C862 333 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 TGFB3P10600 412 aa6.82□□□□□ -1.32
SIK3-208ENST00000472648 HSPD1P10809 573 aaKnown RBP6.82□□□□□ -1.32
SIK3-208ENST00000472648 GLULP15104 373 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms