RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 PPFIA2O75334 1257 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 UBOX5O94941 541 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 RARAP10276 462 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 ACTN1P12814 892 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 ALADP13716 330 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 MMP13P45452 471 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 BIRC2Q13490 618 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 ITIH4Q14624 930 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 ZKSCAN8Q15776 578 aaPredicted RBP15.23■□□□□ 0.03
IFFO1-208ENST00000472558 PNMA1Q8ND90 353 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 ARMC2Q8NEN0 867 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 RNF217Q8TC41 542 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 SPAG5Q96R06 1193 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 BARHL2Q9NY43 387 aa15.23■□□□□ 0.03
IFFO1-208ENST00000472558 CASZ1Q86V15 1759 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 PVALEFA0A1B0GWK0 134 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 TRAF5O00463 557 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 PCP11498 1178 aaKnown RBP15.22■□□□□ 0.03
IFFO1-208ENST00000472558 NCALDP61601 193 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 SUSD4Q5VX71 490 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 IRF2BP2Q7Z5L9 587 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 ANKS4BQ8N8V4 417 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 TPCN2Q8NHX9 752 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 LARP4BQ92615 738 aaKnown RBP15.22■□□□□ 0.03
IFFO1-208ENST00000472558 RNF25Q96BH1 459 aaPredicted RBP15.22■□□□□ 0.03
IFFO1-208ENST00000472558 GANQ9H2C0 597 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 SMIM23A6NLE4 172 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 SMNDC1O75940 238 aaKnown RBP eCLIP15.22■□□□□ 0.03
IFFO1-208ENST00000472558 UPP2O95045 317 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 FGFR1OPO95684 399 aaKnown RBP15.22■□□□□ 0.03
IFFO1-208ENST00000472558 STARD3NLO95772 234 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 GOLGA8HP0CJ92 632 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 MIS18BP1Q6P0N0 1132 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 DDX12PQ92771 950 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 NUCKS1Q9H1E3 243 aaKnown RBP15.22■□□□□ 0.03
IFFO1-208ENST00000472558 BATF3Q9NR55 127 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 SLC5A4Q9NY91 659 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.22■□□□□ 0.03
IFFO1-208ENST00000472558 STXBP5LQ9Y2K9 1186 aa15.22■□□□□ 0.03
IFFO1-208ENST00000472558 TLDC2A0PJX2 215 aa15.21■□□□□ 0.03
IFFO1-208ENST00000472558 NQO1P15559 274 aaKnown RBP15.21■□□□□ 0.03
IFFO1-208ENST00000472558 ASIC2Q16515 512 aa15.21■□□□□ 0.03
IFFO1-208ENST00000472558 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.03
IFFO1-208ENST00000472558 ERICH1Q86X53 443 aa15.21■□□□□ 0.03
IFFO1-208ENST00000472558 ZNF34Q8IZ26 560 aa15.21■□□□□ 0.03
IFFO1-208ENST00000472558 CALML4Q96GE6 196 aa15.21■□□□□ 0.03
IFFO1-208ENST00000472558 NLRP3Q96P20 1036 aa15.21■□□□□ 0.03
IFFO1-208ENST00000472558 TBC1D7Q9P0N9 293 aa15.21■□□□□ 0.03
IFFO1-208ENST00000472558 POTEMA6NI47 508 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 EIF4E1BA6NMX2 242 aaKnown RBP15.21■□□□□ 0.02
IFFO1-208ENST00000472558 ENO4A6NNW6 628 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 BTNL10A8MVZ5 291 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 CCDC188H7C350 402 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 IFNAR2P48551 515 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 ECM1Q16610 540 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 DPY19L2P1Q6NXN4 242 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 KIF2BQ8N4N8 673 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 FMO2Q99518 471 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 ARHGEF10LQ9HCE6 1279 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 ZDHHC18Q9NUE0 388 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 NAGPAQ9UK23 515 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 THRAP3Q9Y2W1 955 aaKnown RBP15.21■□□□□ 0.02
IFFO1-208ENST00000472558 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.02
IFFO1-208ENST00000472558 ZNF804BA4D1E1 1349 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 KRT16P08779 473 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 ABL2P42684 1182 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 FKBP3Q00688 224 aaKnown RBP15.2■□□□□ 0.02
IFFO1-208ENST00000472558 TFAP4Q01664 338 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 TRIM59Q8IWR1 403 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 PARD3BQ8TEW8 1205 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 AZI2Q9H6S1 392 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 FAM170AA1A519 330 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 USP17L3A6NCW0 530 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 USP17L4A6NCW7 530 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 IGF2BP3O00425 579 aaKnown RBP eCLIP15.2■□□□□ 0.02
IFFO1-208ENST00000472558 EDIL3O43854 480 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 GRM4Q14833 912 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 MAEAQ7L5Y9 396 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 USP17L1Q7RTZ2 530 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 PEX26Q7Z412 305 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 ADAT2Q7Z6V5 191 aaKnown RBP15.2■□□□□ 0.02
IFFO1-208ENST00000472558 DZIP3Q86Y13 1208 aaKnown RBP15.2■□□□□ 0.02
IFFO1-208ENST00000472558 UHMK1Q8TAS1 419 aaKnown RBP15.2■□□□□ 0.02
IFFO1-208ENST00000472558 SLITRK6Q9H5Y7 841 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 ERVK-5Q9HDB9 667 aa15.2■□□□□ 0.02
IFFO1-208ENST00000472558 NOP53Q9NZM5 478 aaKnown RBP15.2■□□□□ 0.02
IFFO1-208ENST00000472558 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
IFFO1-208ENST00000472558 VIMP08670 466 aaKnown RBP15.19■□□□□ 0.02
IFFO1-208ENST00000472558 CYP19A1P11511 503 aaPredicted RBP15.19■□□□□ 0.02
IFFO1-208ENST00000472558 SLC9A1P19634 815 aa15.19■□□□□ 0.02
IFFO1-208ENST00000472558 CAPRIN2Q6IMN6 1127 aaKnown RBP15.19■□□□□ 0.02
IFFO1-208ENST00000472558 SLFN11Q7Z7L1 901 aa15.19■□□□□ 0.02
IFFO1-208ENST00000472558 NEK8Q86SG6 692 aa15.19■□□□□ 0.02
IFFO1-208ENST00000472558 NT5DC3Q86UY8 548 aa15.19■□□□□ 0.02
IFFO1-208ENST00000472558 NELFCDQ8IXH7 590 aa15.19■□□□□ 0.02
IFFO1-208ENST00000472558 MYOCDQ8IZQ8 938 aa15.19■□□□□ 0.02
IFFO1-208ENST00000472558 RBM46Q8TBY0 533 aaKnown RBP15.19■□□□□ 0.02
IFFO1-208ENST00000472558 MICAL1Q8TDZ2 1067 aa15.19■□□□□ 0.02
IFFO1-208ENST00000472558 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms