RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 CXCL17Q6UXB2 119 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 PLPPR4Q7Z2D5 763 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 CNNM3Q8NE01 707 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 ZNF333Q96JL9 665 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 FAM167AQ96KS9 214 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
UBE2F-220ENST00000472479 KATNAL1Q9BW62 490 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 TUT1Q9H6E5 874 aaKnown RBP11.76□□□□□ -0.53
UBE2F-220ENST00000472479 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
UBE2F-220ENST00000472479 LMBRD1Q9NUN5 540 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 MBD3O95983 291 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 ASGR1P07306 291 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 YWHABP31946 246 aaKnown RBP11.76□□□□□ -0.53
UBE2F-220ENST00000472479 SLC26A2P50443 739 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 IGBP1P78318 339 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 AMPD3Q01432 767 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 PRKCEQ02156 737 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 LRRC41Q15345 812 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 NFKBIBQ15653 356 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 SV2BQ7L1I2 683 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 TRIM50Q86XT4 487 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 C7orf31Q8N865 590 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 ARMC5Q96C12 935 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 CEP170P1Q96L14 293 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 HSD17B14Q9BPX1 270 aa11.76□□□□□ -0.53
UBE2F-220ENST00000472479 UPF3AQ9H1J1 476 aaKnown RBP11.76□□□□□ -0.53
UBE2F-220ENST00000472479 PCNTO95613 3336 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 KIAA1217Q5T5P2 1943 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 MYH15Q9Y2K3 1946 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 E9PMD0 336 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 HBP1O60381 514 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 LGR5O75473 907 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 ZNF202O95125 648 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 SGPL1O95470 568 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 OATP04181 439 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 GJB1P08034 283 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 SPATA31C1P0DKV0 1188 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 LIG1P18858 919 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 MUTP22033 750 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 PSEN2P49810 448 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 FAM160A1Q05DH4 1040 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 GRB10Q13322 594 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 MFSD10Q14728 455 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 UGCGQ16739 394 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 MTERF2Q49AM1 385 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 LHX8Q68G74 356 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 C4orf19Q8IY42 314 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 U2AF1L4Q8WU68 220 aaKnown RBP11.75□□□□□ -0.53
UBE2F-220ENST00000472479 PNMA5Q96PV4 448 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 MMTAG2Q9BU76 263 aaKnown RBP11.75□□□□□ -0.53
UBE2F-220ENST00000472479 LRRC27Q9C0I9 530 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 USP25Q9UHP3 1055 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 SERTAD1Q9UHV2 236 aa11.75□□□□□ -0.53
UBE2F-220ENST00000472479 MAFBQ9Y5Q3 323 aaPredicted RBP11.75□□□□□ -0.53
UBE2F-220ENST00000472479 EMSYQ7Z589 1322 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 ADAMTS4O75173 837 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 CABYRO75952 493 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 PLA2G4BP0C869 781 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 GNAT1P11488 350 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 AFMP43652 599 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 ACLYP53396 1101 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 PSMC6P62333 389 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 MCM6Q14566 821 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 ECM1Q16610 540 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 SKOR2Q2VWA4 1001 aaPredicted RBP11.74□□□□□ -0.53
UBE2F-220ENST00000472479 KANK3Q6NY19 840 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 KCTD17Q8N5Z5 321 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 KLHDC9Q8NEP7 349 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 AFAP1L1Q8TED9 768 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
UBE2F-220ENST00000472479 LARP4BQ92615 738 aaKnown RBP11.74□□□□□ -0.53
UBE2F-220ENST00000472479 RAD54LQ92698 747 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 PCYT2Q99447 389 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 SH2D3AQ9BRG2 576 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 TSEN34Q9BSV6 310 aaKnown RBP11.74□□□□□ -0.53
UBE2F-220ENST00000472479 BHMT2Q9H2M3 363 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 CUEDC2Q9H467 287 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 ZHX3Q9H4I2 956 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 PAK6Q9NQU5 681 aaPredicted RBP11.74□□□□□ -0.53
UBE2F-220ENST00000472479 ANKEF1Q9NU02 776 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 DACT1Q9NYF0 836 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 STK17AQ9UEE5 414 aa11.74□□□□□ -0.53
UBE2F-220ENST00000472479 IGKV6D-21A0A0A0MT36 114 aa11.73□□□□□ -0.53
UBE2F-220ENST00000472479 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
UBE2F-220ENST00000472479 ZBTB39O15060 712 aa11.73□□□□□ -0.53
UBE2F-220ENST00000472479 ZNF862O60290 1169 aa11.73□□□□□ -0.53
UBE2F-220ENST00000472479 NR1I2O75469 434 aa11.73□□□□□ -0.53
UBE2F-220ENST00000472479 EYA4O95677 639 aa11.73□□□□□ -0.53
UBE2F-220ENST00000472479 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
UBE2F-220ENST00000472479 POLGP54098 1239 aaPredicted RBP11.73□□□□□ -0.53
UBE2F-220ENST00000472479 PURAQ00577 322 aaKnown RBP11.73□□□□□ -0.53
UBE2F-220ENST00000472479 PPFIA1Q13136 1202 aa11.73□□□□□ -0.53
UBE2F-220ENST00000472479 LONRF3Q496Y0 759 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms