RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 SLC5A5Q92911 643 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 CEP72Q9P209 647 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 PRDM4Q9UKN5 801 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 RAB21Q9UL25 225 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 BCS1LQ9Y276 419 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 PCDHB13Q9Y5F0 798 aa16.55■□□□□ 0.24
UBXN11-213ENST00000472155 TMEM150BA6NC51 233 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 GAS7O60861 476 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 ZBTB7AO95365 584 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 LCA5LO95447 670 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 DNA2P51530 1060 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 TERF2Q15554 542 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 GSPT2Q8IYD1 628 aaKnown RBP16.54■□□□□ 0.24
UBXN11-213ENST00000472155 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 GDAP1L1Q96MZ0 367 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 WDR11Q9BZH6 1224 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 TRAF3IP3Q9Y228 551 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 KIF13BQ9NQT8 1826 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 A0A087X0T9 212 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 H3BQF6 201 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 NR3C1P04150 777 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 FAM228BP0C875 321 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 PLS1Q14651 629 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 TCERG1LQ5VWI1 586 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 PRAMEF18Q5VWM3 479 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 FOXR2Q6PJQ5 311 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 MYCT1Q8N699 235 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 ZBED3Q96IU2 234 aaPredicted RBP16.54■□□□□ 0.24
UBXN11-213ENST00000472155 FIZ1Q96SL8 496 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 MYOZ2Q9NPC6 264 aa16.54■□□□□ 0.24
UBXN11-213ENST00000472155 TBCAO75347 108 aaKnown RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 KCTD19Q17RG1 926 aaPredicted RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 EDRF1Q3B7T1 1238 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 MUM1L1Q5H9M0 696 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 SFMBT2Q5VUG0 894 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 WNK4Q96J92 1243 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 RAVER2Q9HCJ3 691 aaKnown RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 ADAMTS1Q9UHI8 967 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 CCPG1Q9ULG6 757 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 FER1L6Q2WGJ9 1857 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 N4BP1O75113 896 aaKnown RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 PTGER2P43116 358 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 PPP2R5CQ13362 524 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 TBC1D10BQ4KMP7 808 aaPredicted RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 SAMD7Q7Z3H4 446 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 RBM46Q8TBY0 533 aaKnown RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 HOOK2Q96ED9 719 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 UBXN6Q9BZV1 441 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 PPP1R1BQ9UD71 204 aaPredicted RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 ARMCX3Q9UH62 379 aaPredicted RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 RGPD3A6NKT7 1758 aaPredicted RBP16.53■□□□□ 0.24
UBXN11-213ENST00000472155 RGPD4Q7Z3J3 1758 aa16.53■□□□□ 0.24
UBXN11-213ENST00000472155 TISP43B9A030 160 aa16.52■□□□□ 0.24
UBXN11-213ENST00000472155 PRELPP51888 382 aa16.52■□□□□ 0.24
UBXN11-213ENST00000472155 PTPROQ16827 1216 aa16.52■□□□□ 0.24
UBXN11-213ENST00000472155 CREG2Q8IUH2 290 aa16.52■□□□□ 0.24
UBXN11-213ENST00000472155 TEPSINQ96N21 525 aa16.52■□□□□ 0.24
UBXN11-213ENST00000472155 MRPL11Q9Y3B7 192 aaKnown RBP16.52■□□□□ 0.24
UBXN11-213ENST00000472155 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.23
UBXN11-213ENST00000472155 MYBL2P10244 700 aa16.52■□□□□ 0.23
UBXN11-213ENST00000472155 EPS15P42566 896 aa16.52■□□□□ 0.23
UBXN11-213ENST00000472155 TUBB2AQ13885 445 aa16.52■□□□□ 0.23
UBXN11-213ENST00000472155 MCTP2Q6DN12 878 aa16.52■□□□□ 0.23
UBXN11-213ENST00000472155 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.23
UBXN11-213ENST00000472155 CLEC4DQ8WXI8 215 aa16.52■□□□□ 0.23
UBXN11-213ENST00000472155 LXNQ9BS40 222 aa16.52■□□□□ 0.23
UBXN11-213ENST00000472155 TUBB2BQ9BVA1 445 aa16.52■□□□□ 0.23
UBXN11-213ENST00000472155 PACSIN2Q9UNF0 486 aaPredicted RBP16.52■□□□□ 0.23
UBXN11-213ENST00000472155 TBC1D12O60347 775 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 FAM13AO94988 1023 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 GNA14O95837 355 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 PON1P27169 355 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 OAS2P29728 719 aaKnown RBP16.51■□□□□ 0.23
UBXN11-213ENST00000472155 SPP2Q13103 211 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 SMC1AQ14683 1233 aaKnown RBP16.51■□□□□ 0.23
UBXN11-213ENST00000472155 BRD3Q15059 726 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 SLC35C1Q96A29 364 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 GOLPH3Q9H4A6 298 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 SNX12Q9UMY4 172 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 L1RE1Q9UN81 338 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 PDXKO00764 312 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 ALAS1P13196 640 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 KLRC1P26715 233 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
UBXN11-213ENST00000472155 PTK2Q05397 1052 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
UBXN11-213ENST00000472155 FAM83AQ86UY5 434 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 DAW1Q8N136 415 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 AGBL3Q8NEM8 1001 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 MS4A14Q96JA4 679 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 KCNH7Q9NS40 1196 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 SYNPO2Q9UMS6 1093 aa16.51■□□□□ 0.23
UBXN11-213ENST00000472155 MAP2K7O14733 419 aa16.5■□□□□ 0.23
UBXN11-213ENST00000472155 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms