RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 NCAPG2Q86XI2 1143 aa5.32□□□□□ -1.56
LMNB1-205ENST00000472034 MKL1Q969V6 931 aa5.32□□□□□ -1.56
LMNB1-205ENST00000472034 RPGRIP1Q96KN7 1286 aa5.32□□□□□ -1.56
LMNB1-205ENST00000472034 FTOQ9C0B1 505 aaKnown RBP eCLIP5.32□□□□□ -1.56
LMNB1-205ENST00000472034 INCENPQ9NQS7 918 aa5.32□□□□□ -1.56
LMNB1-205ENST00000472034 TRMT13Q9NUP7 481 aaKnown RBP5.32□□□□□ -1.56
LMNB1-205ENST00000472034 ZFATQ9P243 1243 aa5.32□□□□□ -1.56
LMNB1-205ENST00000472034 KCNG1Q9UIX4 513 aa5.32□□□□□ -1.56
LMNB1-205ENST00000472034 SLC6A14Q9UN76 642 aa5.32□□□□□ -1.56
LMNB1-205ENST00000472034 USP9XQ93008 2570 aaPredicted RBP5.32□□□□□ -1.56
LMNB1-205ENST00000472034 MYH13Q9UKX3 1938 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 ASTN1O14525 1302 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 MAPK8IP3Q9UPT6 1336 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 RALGAPA2Q2PPJ7 1873 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 SPDYE3A6NKU9 549 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 STRNO43815 780 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 LILRB5O75023 590 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 DUSP11O75319 330 aaKnown RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 RGS9O75916 674 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 DDX58O95786 925 aaKnown RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 SNAI1O95863 264 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 LDHBP07195 334 aaKnown RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 CES1P23141 567 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 SP100P23497 879 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 CALRP27797 417 aaKnown RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 BTDP43251 543 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 ITGA7Q13683 1181 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 PLS1Q14651 629 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 SETDB1Q15047 1291 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 ANGPT1Q15389 498 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 PTPN21Q16825 1174 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 LRRC24Q50LG9 513 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 CAVIN4Q5BKX8 364 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 CASC1Q6TDU7 716 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 LBX2Q6XYB7 198 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 C1orf229Q6ZS94 237 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 TSHZ1Q6ZSZ6 1077 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 FAM43BQ6ZT52 329 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 SHCBP1Q8NEM2 672 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 ACER1Q8TDN7 264 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 SPATC1LQ9H0A9 340 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 NSUN3Q9H649 340 aaKnown RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 NRBP1Q9UHY1 535 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 CD207Q9UJ71 328 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 ZHX1Q9UKY1 873 aaPredicted RBP5.31□□□□□ -1.56
LMNB1-205ENST00000472034 ZBTB21Q9ULJ3 1066 aa5.31□□□□□ -1.56
LMNB1-205ENST00000472034 MCM3APO60318 1980 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 NRDCO43847 1150 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 PHACTR2O75167 634 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 GJB5O95377 273 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 PFKMP08237 780 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 ASNSP08243 561 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 ACTN1P12814 892 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 CPB1P15086 417 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 EIF2AK2P19525 551 aaKnown RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 MAPK1P28482 360 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 ICAM3P32942 547 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 TMPOP42166 694 aaKnown RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 KCNJ6P48051 423 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 RRP1P56182 461 aaKnown RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 GJA9P57773 515 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 ARHGAP4P98171 946 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 SLC20A2Q08357 652 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 NEXNQ0ZGT2 675 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 GPM6BQ13491 265 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 GPNMBQ14956 572 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 CCDC57Q2TAC2 916 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 ZNF792Q3KQV3 632 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 EPC2Q52LR7 807 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 PPM1JQ5JR12 505 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 CWF19L1Q69YN2 538 aaKnown RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 VGLL2Q8N8G2 317 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 PCSK9Q8NBP7 692 aaKnown RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 OR13H1Q8NG92 308 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 WDR66Q8TBY9 1149 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 SNX29Q8TEQ0 813 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 ZNF384Q8TF68 577 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 MSLNLQ96KJ4 702 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 C12orf42Q96LP6 360 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 DMRTB1Q96MA1 342 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 UPF3AQ9H1J1 476 aaKnown RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 RPAP3Q9H6T3 665 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 NOP53Q9NZM5 478 aaKnown RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 FRRS1LQ9P0K9 344 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 DCTN4Q9UJW0 460 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 FAM184BQ9ULE4 1060 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 DMXL2Q8TDJ6 3036 aa5.3□□□□□ -1.56
LMNB1-205ENST00000472034 COL11A1P12107 1806 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-205ENST00000472034 CNOT1A5YKK6 2376 aaKnown RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 ITPR1Q14643 2758 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 MYO10Q9HD67 2058 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 TANC1Q9C0D5 1861 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 LOC102724159A0A0B4J2E5 919 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.29□□□□□ -1.56
LMNB1-205ENST00000472034 M0R082 166 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 GNB5O14775 395 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 IQCF3P0C7M6 154 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 FCER1AP12319 257 aa5.29□□□□□ -1.56
LMNB1-205ENST00000472034 HOXD8P13378 290 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms