RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 PNKPQ96T60 521 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 RHOXF2Q9BQY4 288 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 TEKT3Q9BXF9 490 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 FGFBP2Q9BYJ0 223 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 GANQ9H2C0 597 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 SHTN1A0MZ66 631 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 CLRN2A0PK11 232 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 GAS7O60861 476 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 SASH3O75995 380 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 GFPT2O94808 682 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 PLEKP08567 350 aaPredicted RBP11.68□□□□□ -0.54
APLF-204ENST00000471727 FDX1P10109 184 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 PAFAH1B1P43034 410 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 GHRHRQ02643 423 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 KLHL30Q0D2K2 578 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 ALCAMQ13740 583 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 EXOC3L4Q17RC7 722 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 C1orf186Q6ZWK4 172 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 LPAR1Q92633 364 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 ZBED3Q96IU2 234 aaPredicted RBP11.68□□□□□ -0.54
APLF-204ENST00000471727 MMS19Q96T76 1030 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 ABCB6Q9NP58 842 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
APLF-204ENST00000471727 PSME4Q14997 1843 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 TNS1Q9HBL0 1735 aaKnown RBP11.67□□□□□ -0.54
APLF-204ENST00000471727 EML1O00423 815 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
APLF-204ENST00000471727 RAD17O75943 681 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 PRPF6O94906 941 aaKnown RBP11.67□□□□□ -0.54
APLF-204ENST00000471727 GCNT3O95395 438 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 NR3C1P04150 777 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 ICAM1P05362 532 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 MAPTP10636 758 aaKnown RBP11.67□□□□□ -0.54
APLF-204ENST00000471727 GUCY2CP25092 1073 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 PSMC2P35998 433 aaKnown RBP11.67□□□□□ -0.54
APLF-204ENST00000471727 PRKCIP41743 596 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 PTGER2P43116 358 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 ZNF131P52739 623 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 VSNL1P62760 191 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 RAD51AP2Q09MP3 1159 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 NAB2Q15742 525 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 CCDC174Q6PII3 467 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 ZNF771Q7L3S4 317 aaPredicted RBP11.67□□□□□ -0.54
APLF-204ENST00000471727 HS2ST1Q7LGA3 356 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 VPS36Q86VN1 386 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 LDHDQ86WU2 507 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 NOA1Q8NC60 698 aaKnown RBP11.67□□□□□ -0.54
APLF-204ENST00000471727 VTI1AQ96AJ9 217 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 DYDC2Q96IM9 177 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 MXRA8Q9BRK3 442 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 ZNF577Q9BSK1 485 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 VEZTQ9HBM0 779 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 HDAC6Q9UBN7 1215 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 DUSP10Q9Y6W6 482 aa11.67□□□□□ -0.54
APLF-204ENST00000471727 FRMPD4Q14CM0 1322 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 MOCS3O95396 460 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 MYBP10242 640 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 HSD17B4P51659 736 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 CYP4A11Q02928 519 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 TNFAIP1Q13829 316 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 RAPGEF1Q13905 1077 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 EZH2Q15910 746 aaKnown RBP11.66□□□□□ -0.54
APLF-204ENST00000471727 GLE1Q53GS7 698 aaKnown RBP11.66□□□□□ -0.54
APLF-204ENST00000471727 CCDC181Q5TID7 509 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 KLHDC7AQ5VTJ3 777 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 B3GNT9Q6UX72 402 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 CREG2Q8IUH2 290 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 TPH2Q8IWU9 490 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 MYCT1Q8N699 235 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 PRPF38AQ8NAV1 312 aaKnown RBP11.66□□□□□ -0.54
APLF-204ENST00000471727 CYP2W1Q8TAV3 490 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 TMEM174Q8WUU8 243 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 SPAG5Q96R06 1193 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 RUSC1Q9BVN2 902 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 TIPINQ9BVW5 301 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 RGL1Q9NZL6 768 aa11.66□□□□□ -0.54
APLF-204ENST00000471727 CES2O00748 559 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 TLR2O60603 784 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 CCDC172P0C7W6 258 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 UCHL3P15374 230 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 OAS2P29728 719 aaKnown RBP11.65□□□□□ -0.54
APLF-204ENST00000471727 HOXD13P35453 343 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 CASP5P51878 434 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 SNRPFP62306 86 aaKnown RBP11.65□□□□□ -0.54
APLF-204ENST00000471727 RASSF7Q02833 373 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 GFPT1Q06210 699 aaPredicted RBP11.65□□□□□ -0.54
APLF-204ENST00000471727 CTTNQ14247 550 aaKnown RBP11.65□□□□□ -0.54
APLF-204ENST00000471727 PPP2R5AQ15172 486 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 KIAA1755Q5JYT7 1200 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 SLC9A9Q8IVB4 645 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 SLC17A8Q8NDX2 589 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 TBC1D5Q92609 795 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 OSBPL9Q96SU4 736 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 MED4Q9NPJ6 270 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 PSD3Q9NYI0 1048 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 PGAP2Q9UHJ9 254 aa11.65□□□□□ -0.54
APLF-204ENST00000471727 INTUQ9ULD6 942 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms