RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 TTC26A0AVF1 554 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 BACH1O14867 736 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 PDHA1P08559 390 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 NT5C2P49902 561 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 GUCY2FP51841 1108 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 BPIFB4P59827 614 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 SULT2A1Q06520 285 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 ODF2Q5BJF6 829 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 GALNT17Q6IS24 598 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 BICDL1Q6ZP65 573 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 ASAP3Q8TDY4 903 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 STK32AQ8WU08 396 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 KCNN1Q92952 543 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 PPP2R3CQ969Q6 453 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 RAB3IPQ96QF0 476 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 NSRP1Q9H0G5 558 aaKnown RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 THAP9Q9H5L6 903 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 PDP2Q9P2J9 529 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 SERTAD1Q9UHV2 236 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 GRID2IPA4D2P6 1211 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 A8MUI8 341 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 PPP1R3GB7ZBB8 358 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 SMAPO00193 183 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 CCNB1P14635 433 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 ZFXP17010 805 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 MATR3P43243 847 aaKnown RBP eCLIP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 CCDC15Q0P6D6 951 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 CUL1Q13616 776 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 UAP1Q16222 522 aaPredicted RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 CFAP221Q4G0U5 840 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 VPS37DQ86XT2 251 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 BRD8Q9H0E9 1235 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 ISCUQ9H1K1 167 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 SH2D4AQ9H788 454 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 ABCF3Q9NUQ8 709 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 PAIP2BQ9ULR5 123 aaKnown RBP11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 LRCH1Q9Y2L9 728 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 COMMD3-BMI1R4GMX3 469 aa11.7□□□□□ -0.54
CHMP2B-203ENST00000471660 BHMG1C9JSJ3 638 aaPredicted RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 F8VZ95 297 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 TPBGLP0DKB5 382 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 CBX3Q13185 183 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 LSAMPQ13449 338 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 ITPK1Q13572 414 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 PARP6Q2NL67 630 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 CCDC92Q53HC0 331 aaPredicted RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 SPDYCQ5MJ68 293 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 ZNF365Q70YC5 407 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 PHC3Q8NDX5 983 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 DNAJC9Q8WXX5 260 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 IFT81Q8WYA0 676 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 APPBP2Q92624 585 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 TFR2Q9UP52 801 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 CNTNAP4Q9C0A0 1308 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 O00370 1275 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 CCT6AP40227 531 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 MRPS25P82663 173 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 USH1GQ495M9 461 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 EXOC3L1Q86VI1 746 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 KCNV2Q8TDN2 545 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 ATXN2LQ8WWM7 1075 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 IRGQQ8WZA9 623 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 GSDMAQ96QA5 445 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 CORO1BQ9BR76 489 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 ZNHIT6Q9NWK9 470 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 UTP6Q9NYH9 597 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 BARX2Q9UMQ3 279 aaPredicted RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 NOVA2Q9UNW9 492 aaKnown RBP11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 MYH7BA7E2Y1 1941 aa11.69□□□□□ -0.54
CHMP2B-203ENST00000471660 EIF4E1BA6NMX2 242 aaKnown RBP11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 E7EWF7 191 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 POLR2DO15514 142 aaKnown RBP11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 PTPREP23469 700 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 CTNNA1P35221 906 aaKnown RBP11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 MAGOHP61326 146 aaKnown RBP11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 TCP11X2Q5H9J9 407 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 MFSD4BQ5TF39 518 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 NFRKBQ6P4R8 1299 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 RBBP8NLQ8NC74 664 aaPredicted RBP11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 LPIN2Q92539 896 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 MAGOHBQ96A72 148 aaKnown RBP11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 NEUROD6Q96NK8 337 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 MPHOSPH6Q99547 160 aaKnown RBP11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 MTRQ99707 1265 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 CARD9Q9H257 536 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 SEC31BQ9NQW1 1179 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 RMND1Q9NWS8 449 aa11.68□□□□□ -0.54
CHMP2B-203ENST00000471660 TMOD4Q9NZQ9 345 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms