RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ATG3Q9NT62 314 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 PUF60Q9UHX1 559 aaKnown RBP8.41□□□□□ -1.06
SMC5-202ENST00000471372 TUBD1Q9UJT1 453 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 TELO2Q9Y4R8 837 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 RASSF10A6NK89 507 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 FAM90A27PA6NNH2 459 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 TPP1O14773 563 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 SLC27A2O14975 620 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 POU2F2P09086 479 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 RHCEP18577 417 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 CHRNA4P43681 627 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 RHDQ02161 417 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 ADCY1Q08828 1119 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 EPHA7Q15375 998 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 MROH9Q5TGP6 573 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 KCTD1Q719H9 257 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 KCNK18Q7Z418 384 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 RIOX2Q8IUF8 465 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 DIS3LQ8TF46 1054 aaKnown RBP8.4□□□□□ -1.06
SMC5-202ENST00000471372 MAP6Q96JE9 813 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 HHIPL1Q96JK4 782 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 G6PC3Q9BUM1 346 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 TNFRSF10DQ9UBN6 386 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 EBF1Q9UH73 591 aa8.4□□□□□ -1.06
SMC5-202ENST00000471372 KRIT1O00522 736 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 NDUFS2O75306 463 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 MANFP55145 182 aaKnown RBP8.39□□□□□ -1.07
SMC5-202ENST00000471372 KIF23Q02241 960 aaPredicted RBP8.39□□□□□ -1.07
SMC5-202ENST00000471372 LLGL1Q15334 1064 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 FAM83BQ5T0W9 1011 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 ERAP2Q6P179 960 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 SLCO6A1Q86UG4 719 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 CD163Q86VB7 1156 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 GRAMD1CQ8IYS0 662 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 TP53INP1Q96A56 240 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 OSBPL1AQ9BXW6 950 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 BSDC1Q9NW68 430 aaPredicted RBP8.39□□□□□ -1.07
SMC5-202ENST00000471372 USP36Q9P275 1121 aaKnown RBP8.39□□□□□ -1.07
SMC5-202ENST00000471372 PPP2R3BQ9Y5P8 575 aa8.39□□□□□ -1.07
SMC5-202ENST00000471372 BUB1BO60566 1050 aaPredicted RBP8.38□□□□□ -1.07
SMC5-202ENST00000471372 C4BPAP04003 597 aaKnown RBP8.38□□□□□ -1.07
SMC5-202ENST00000471372 LPLP06858 475 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 PTPN1P18031 435 aaKnown RBP8.38□□□□□ -1.07
SMC5-202ENST00000471372 NFIAQ12857 509 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 UGT8Q16880 541 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMC5-202ENST00000471372 STEAP3Q658P3 488 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 CCDC62Q6P9F0 684 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 PRR23CQ6ZRP0 262 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 OVCH2Q7RTZ1 564 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 FAM43AQ8N2R8 423 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 LZTR1Q8N653 840 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 PPM1NQ8N819 430 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 VPS37AQ8NEZ2 397 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 PPP1R35Q8TAP8 253 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 NETO1Q8TDF5 533 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 SSH1Q8WYL5 1049 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 GJA10Q969M2 543 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 METTL22Q9BUU2 404 aaPredicted RBP8.38□□□□□ -1.07
SMC5-202ENST00000471372 NAA15Q9BXJ9 866 aaKnown RBP8.38□□□□□ -1.07
SMC5-202ENST00000471372 RIC8BQ9NVN3 520 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 KLHL11Q9NVR0 708 aa8.38□□□□□ -1.07
SMC5-202ENST00000471372 ELL2O00472 640 aaPredicted RBP8.37□□□□□ -1.07
SMC5-202ENST00000471372 SH3BP5O60239 455 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 TACR1P25103 407 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 SDHAP31040 664 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 FNTBP49356 437 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 PITRM1Q5JRX3 1037 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 ZBTB41Q5SVQ8 909 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 BTBD8Q5XKL5 378 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 TOGARAM2Q6ZUX3 1019 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 SKAP1Q86WV1 359 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 Q8N3U1 123 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 FAM156AQ8NDB6 213 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 SHKBP1Q8TBC3 707 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 DBNDD2Q9BQY9 259 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 POFUT1Q9H488 388 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 PRDM12Q9H4Q4 367 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 KCNG1Q9UIX4 513 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 SNX11Q9Y5W9 270 aa8.37□□□□□ -1.07
SMC5-202ENST00000471372 TMEM265A0A087WTH1 108 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 A0A1W2PQ45 241 aaPredicted RBP8.36□□□□□ -1.07
SMC5-202ENST00000471372 A0A1W2PQY0 241 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 USP2O75604 605 aaPredicted RBP8.36□□□□□ -1.07
SMC5-202ENST00000471372 ZBED1O96006 694 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 NTRK1P04629 796 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 MSL3P1P0C860 447 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 SLC5A1P13866 664 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 TRAPPC10P48553 1259 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 EPHA5P54756 1037 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 GJA9P57773 515 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 TUSC3Q13454 348 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 UAP1L1Q3KQV9 507 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 HSF5Q4G112 596 aaPredicted RBP8.36□□□□□ -1.07
SMC5-202ENST00000471372 INO80DQ53TQ3 878 aaPredicted RBP8.36□□□□□ -1.07
SMC5-202ENST00000471372 HSP90AB4PQ58FF6 505 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 ESPNLQ6ZVH7 1005 aa8.36□□□□□ -1.07
SMC5-202ENST00000471372 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.36□□□□□ -1.07
SMC5-202ENST00000471372 FAM193BQ96PV7 902 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms