RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 HSP90AA1P07900 732 aaKnown RBP22.22■■□□□ 1.15
HDAC7-220ENST00000471235 BMP8BP34820 402 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 RILPL1Q5EBL4 403 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 MARCH8Q5T0T0 291 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 FERMT3Q86UX7 667 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 CKAP2LQ8IYA6 745 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 TMEM199Q8N511 208 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 BANK1Q8NDB2 785 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 BBXQ8WY36 941 aaPredicted RBP22.22■■□□□ 1.15
HDAC7-220ENST00000471235 SCLYQ96I15 445 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 FAM167AQ96KS9 214 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 UBE2OQ9C0C9 1292 aaKnown RBP22.22■■□□□ 1.15
HDAC7-220ENST00000471235 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.22■■□□□ 1.15
HDAC7-220ENST00000471235 TUBE1Q9UJT0 475 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 PCDHA12Q9UN75 941 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 MTMR6Q9Y217 621 aa22.22■■□□□ 1.15
HDAC7-220ENST00000471235 RRN3P2A6NIE6 340 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 ZBTB42B2RXF5 422 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 OATP04181 439 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 CSF2RAP15509 400 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 EPHB4P54760 987 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 RUFY4Q6ZNE9 571 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 BRAPQ7Z569 592 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 C4orf32Q8N8J7 132 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 TNPO1Q92973 898 aaKnown RBP22.21■■□□□ 1.15
HDAC7-220ENST00000471235 ZBTB10Q96DT7 871 aa22.21■■□□□ 1.15
HDAC7-220ENST00000471235 POTEMA6NI47 508 aa22.2■■□□□ 1.14
HDAC7-220ENST00000471235 CKBP12277 381 aa22.2■■□□□ 1.14
HDAC7-220ENST00000471235 RESTQ13127 1097 aa22.2■■□□□ 1.14
HDAC7-220ENST00000471235 PPIGQ13427 754 aaKnown RBP eCLIP22.2■■□□□ 1.148e-6■■■■□ 22.7
HDAC7-220ENST00000471235 EPHA7Q15375 998 aa22.2■■□□□ 1.14
HDAC7-220ENST00000471235 TRAF7Q6Q0C0 670 aa22.2■■□□□ 1.14
HDAC7-220ENST00000471235 TRMT1LQ7Z2T5 733 aaKnown RBP22.2■■□□□ 1.14
HDAC7-220ENST00000471235 RETREG2Q8NC44 543 aa22.2■■□□□ 1.14
HDAC7-220ENST00000471235 TRIOBPQ9H2D6 2365 aa22.2■■□□□ 1.14
HDAC7-220ENST00000471235 STX6O43752 255 aa22.19■■□□□ 1.14
HDAC7-220ENST00000471235 STBD1O95210 358 aa22.19■■□□□ 1.14
HDAC7-220ENST00000471235 SELPP16109 830 aa22.19■■□□□ 1.14
HDAC7-220ENST00000471235 PSMC5P62195 406 aa22.19■■□□□ 1.14
HDAC7-220ENST00000471235 PTGDRQ13258 359 aa22.19■■□□□ 1.14
HDAC7-220ENST00000471235 ZNF484Q5JVG2 852 aa22.19■■□□□ 1.14
HDAC7-220ENST00000471235 LRRC8DQ7L1W4 858 aa22.19■■□□□ 1.14
HDAC7-220ENST00000471235 SPRYD3Q8NCJ5 442 aa22.19■■□□□ 1.14
HDAC7-220ENST00000471235 IQCF3P0C7M6 154 aa22.18■■□□□ 1.14
HDAC7-220ENST00000471235 THPOP40225 353 aa22.18■■□□□ 1.14
HDAC7-220ENST00000471235 QARSP47897 775 aaKnown RBP22.18■■□□□ 1.14
HDAC7-220ENST00000471235 ZNF618Q5T7W0 954 aa22.18■■□□□ 1.14
HDAC7-220ENST00000471235 TAF2Q6P1X5 1199 aa22.18■■□□□ 1.14
HDAC7-220ENST00000471235 DYDC2Q96IM9 177 aa22.18■■□□□ 1.14
HDAC7-220ENST00000471235 LXNQ9BS40 222 aa22.18■■□□□ 1.14
HDAC7-220ENST00000471235 IL23AQ9NPF7 189 aa22.18■■□□□ 1.14
HDAC7-220ENST00000471235 WRAP73Q9P2S5 460 aaPredicted RBP22.18■■□□□ 1.14
HDAC7-220ENST00000471235 SEPT9Q9UHD8 586 aaPredicted RBP22.18■■□□□ 1.14
HDAC7-220ENST00000471235 TMEM150BA6NC51 233 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 CAND2O75155 1236 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 C22orf31O95567 290 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 P4HBP07237 508 aaKnown RBP22.17■■□□□ 1.14
HDAC7-220ENST00000471235 CYP4A11Q02928 519 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 MTHFD1LQ6UB35 978 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 NEK9Q8TD19 979 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 VWCEQ96DN2 955 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 EIF2AK1Q9BQI3 630 aaKnown RBP22.17■■□□□ 1.14
HDAC7-220ENST00000471235 RGL1Q9NZL6 768 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 CEP131Q9UPN4 1083 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 PCDHA2Q9Y5H9 948 aa22.17■■□□□ 1.14
HDAC7-220ENST00000471235 LAD1O00515 517 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 CTSHP09668 335 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 ACRP10323 421 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 KLRC1P26715 233 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 RFC2P35250 354 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 TECP42680 631 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 FXR2P51116 673 aaKnown RBP eCLIP22.16■■□□□ 1.14
HDAC7-220ENST00000471235 ATP2C1P98194 919 aaPredicted RBP22.16■■□□□ 1.14
HDAC7-220ENST00000471235 TMEM266Q2M3C6 531 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 XKR3Q5GH77 459 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 C9orf50Q5SZB4 431 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 NRBP2Q9NSY0 501 aa22.16■■□□□ 1.14
HDAC7-220ENST00000471235 A0A1W2PPC1 479 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 DKC1O60832 514 aaKnown RBP eCLIP22.15■■□□□ 1.14
HDAC7-220ENST00000471235 PRPHP41219 470 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 CTTNQ14247 550 aaKnown RBP22.15■■□□□ 1.14
HDAC7-220ENST00000471235 MBTPS1Q14703 1052 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 GPNMBQ14956 572 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 TARBP2Q15633 366 aaKnown RBP22.15■■□□□ 1.14
HDAC7-220ENST00000471235 PLA2G4FQ68DD2 849 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 C16orf59Q7L2K0 433 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 RPAINQ86UA6 219 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 TDHQ8IZJ6 230 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 DNAJB3Q8WWF6 145 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.15■■□□□ 1.14
HDAC7-220ENST00000471235 NIFKQ9BYG3 293 aaKnown RBP22.15■■□□□ 1.14
HDAC7-220ENST00000471235 FAM49AQ9H0Q0 323 aaPredicted RBP22.15■■□□□ 1.14
HDAC7-220ENST00000471235 TCHHQ07283 1943 aa22.15■■□□□ 1.14
HDAC7-220ENST00000471235 RANBP2P49792 3224 aaKnown RBP22.14■■□□□ 1.14
HDAC7-220ENST00000471235 RBAK-RBAKDNI3L0D1 243 aa22.14■■□□□ 1.13
HDAC7-220ENST00000471235 SHHQ15465 462 aa22.14■■□□□ 1.13
HDAC7-220ENST00000471235 MTERF2Q49AM1 385 aa22.14■■□□□ 1.13
HDAC7-220ENST00000471235 TMEM240Q5SV17 173 aa22.14■■□□□ 1.13
HDAC7-220ENST00000471235 PSRC1Q6PGN9 363 aaPredicted RBP22.14■■□□□ 1.13
HDAC7-220ENST00000471235 ANO5Q75V66 913 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms