RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 GBP5Q96PP8 586 aa11.38□□□□□ -0.59
RRP1B-202ENST00000470886 MMS19Q96T76 1030 aa11.38□□□□□ -0.59
RRP1B-202ENST00000470886 PICK1Q9NRD5 415 aa11.38□□□□□ -0.59
RRP1B-202ENST00000470886 EIF3HO15372 352 aaKnown RBP eCLIP11.37□□□□□ -0.591e-6■□□□□ 8.3
RRP1B-202ENST00000470886 STAM2O75886 525 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 LMNAP02545 664 aaKnown RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 BMP3P12645 472 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 CD19P15391 556 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 PLA2G4AP47712 749 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 MXI1P50539 228 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 CDK17Q00537 523 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 DLGAP5Q15398 846 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 FIGNQ5HY92 759 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 SEPT14Q6ZU15 432 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 ADAT2Q7Z6V5 191 aaKnown RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 SDCCAG8Q86SQ7 713 aaPredicted RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 PPP4R1Q8TF05 950 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 ERGIC2Q96RQ1 377 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 HINFPQ9BQA5 517 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 ZNF577Q9BSK1 485 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 FUT8Q9BYC5 575 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 PPP1R37O75864 691 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 USP11P51784 963 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 KNOP1Q1ED39 458 aaKnown RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 FOXP4Q8IVH2 680 aaPredicted RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 ATP6V0A1Q93050 837 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 AZI2Q9H6S1 392 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 IFT122Q9HBG6 1241 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 HDAC6Q9UBN7 1215 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 IFNAR2P48551 515 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 GFPT1Q06210 699 aaPredicted RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 SYDE2Q5VT97 1194 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 TBC1D9BQ66K14 1250 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 HIBCHQ6NVY1 386 aaPredicted RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 MRRFQ96E11 262 aaKnown RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 EPN3Q9H201 632 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 NOP53Q9NZM5 478 aaKnown RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 PCDHA6Q9UN73 950 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 PCDHA8Q9Y5H6 950 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 PPP1R3GB7ZBB8 358 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 KIF3CO14782 793 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 MEFVO15553 781 aaPredicted RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 IFNB1P01574 187 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 HARSP12081 509 aaKnown RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 HSPA1LP34931 641 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 ANKRD40Q6AI12 368 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 SRBD1Q8N5C6 995 aaKnown RBP11.37□□□□□ -0.59
RRP1B-202ENST00000470886 C3orf20Q8ND61 904 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 Q9H521 79 aa11.37□□□□□ -0.59
RRP1B-202ENST00000470886 IPO5O00410 1097 aaKnown RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 SLC16A3O15427 465 aaKnown RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 DCTN3O75935 186 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 NR3C1P04150 777 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 SLC18A3Q16572 532 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 LRP10Q7Z4F1 713 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 CHP1Q99653 195 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 AP1M1Q9BXS5 423 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 PI4KBQ9UBF8 816 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 RNF8O76064 485 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 MMEP08473 750 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 FGFR2P21802 821 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 GPC5P78333 572 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 TNFAIP1Q13829 316 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 NCAPHQ15003 741 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 DBN1Q16643 649 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 NSMFQ6X4W1 530 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 FAM160B2Q86V87 743 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 MAP7D3Q8IWC1 876 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 ZBTB8OSQ8IWT0 167 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 IRX2Q9BZI1 471 aaPredicted RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 UBE2TQ9NPD8 197 aaPredicted RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 SCINQ9Y6U3 715 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 TNNC2P02585 160 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 SF3B3Q15393 1217 aaKnown RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 SH2D4BQ5SQS7 431 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 BEND6Q5SZJ8 279 aaPredicted RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 AGBL2Q5U5Z8 902 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 RSRC2Q7L4I2 434 aaKnown RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 DPH6Q7L8W6 267 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 DAGLBQ8NCG7 672 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 POMGNT1Q8WZA1 660 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 GRAMD1AQ96CP6 724 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 DNAJC7Q99615 494 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 JPH2Q9BR39 696 aaPredicted RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 COA1Q9GZY4 146 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 AS3MTQ9HBK9 375 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 DNAJC12Q9UKB3 198 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 COMMD10Q9Y6G5 202 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 PDXKO00764 312 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 CLIC2O15247 247 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 MAPK13O15264 365 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 PTPROQ16827 1216 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 STAG2Q8N3U4 1231 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 SMC1BQ8NDV3 1235 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 RILPQ96NA2 401 aa11.36□□□□□ -0.59
RRP1B-202ENST00000470886 NOC2LQ9Y3T9 749 aaKnown RBP11.36□□□□□ -0.59
RRP1B-202ENST00000470886 LAMB4A4D0S4 1761 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms