RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 IGBP1P78318 339 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 HMGN5P82970 282 aaKnown RBP15.98■□□□□ 0.15
TOP3B-215ENST00000470338 MYO9BQ13459 2157 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 TCTN1Q2MV58 587 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 DIS3L2Q8IYB7 885 aaKnown RBP15.98■□□□□ 0.15
TOP3B-215ENST00000470338 RDM1Q8NG50 284 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 PBX4Q9BYU1 374 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 BACH2Q9BYV9 841 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 UNC45AQ9H3U1 944 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 KCNMB3Q9NPA1 279 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 SAMM50Q9Y512 469 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 COL1A2P08123 1366 aa15.98■□□□□ 0.15
TOP3B-215ENST00000470338 TBX3O15119 743 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 CCNT1O60563 726 aaKnown RBP15.97■□□□□ 0.15
TOP3B-215ENST00000470338 CHRNA1P02708 482 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 RPLP2P05387 115 aaKnown RBP15.97■□□□□ 0.15
TOP3B-215ENST00000470338 DNAJB2P25686 324 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 JAK3P52333 1124 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 PLEKHG4Q58EX7 1191 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 ZNF484Q5JVG2 852 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 PHOSPHO2Q8TCD6 241 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 TRAPPC12Q8WVT3 735 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 DNAJB3Q8WWF6 145 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 BBXQ8WY36 941 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-215ENST00000470338 FAM20AQ96MK3 541 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 TTYH1Q9H313 450 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-215ENST00000470338 SEMA6BQ9H3T3 888 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 GABBR1Q9UBS5 961 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
TOP3B-215ENST00000470338 IGSF9BQ9UPX0 1349 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 ABHD14A-ACY1A0A1B0GW23 586 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 ZBTB42B2RXF5 422 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 CD2BP2O95400 341 aaKnown RBP15.96■□□□□ 0.15
TOP3B-215ENST00000470338 CTSHP09668 335 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 ATP2A2P16615 1042 aaKnown RBP15.96■□□□□ 0.15
TOP3B-215ENST00000470338 KLRC1P26715 233 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 PBX2P40425 430 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 FOSBP53539 338 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 MGAT3Q09327 533 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 MTHFD1LQ6UB35 978 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 RSPH3Q86UC2 560 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 FBXO18Q8NFZ0 1043 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 HAS1Q92839 578 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 ZBTB10Q96DT7 871 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 C8orf76Q96K31 380 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 SLC9A7Q96T83 725 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 OSBPL7Q9BZF2 842 aa15.96■□□□□ 0.15
TOP3B-215ENST00000470338 SMIM35A0A1B0GVV1 85 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 CHMP2AO43633 222 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 ZNF862O60290 1169 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 EFCAB14O75071 495 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 MCM2P49736 904 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 WDR5P61964 334 aaKnown RBP15.95■□□□□ 0.14
TOP3B-215ENST00000470338 GUCY1B3Q02153 619 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 PPP2R5CQ13362 524 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
TOP3B-215ENST00000470338 IKBKEQ14164 716 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 SAFBQ15424 915 aaKnown RBP eCLIP15.95■□□□□ 0.14
TOP3B-215ENST00000470338 RAB30Q15771 203 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 MIER3Q7Z3K6 550 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 CKAP2LQ8IYA6 745 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 DBF4BQ8NFT6 615 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 TIFAQ96CG3 184 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 TMX3Q96JJ7 454 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 FAM167AQ96KS9 214 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 MSRAQ9UJ68 235 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 PCDHA11Q9Y5I1 949 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 COL6A3P12111 3177 aa15.95■□□□□ 0.14
TOP3B-215ENST00000470338 RBAK-RBAKDNI3L0D1 243 aa15.94■□□□□ 0.14
TOP3B-215ENST00000470338 MRPS6P82932 125 aaKnown RBP15.94■□□□□ 0.14
TOP3B-215ENST00000470338 UGCGQ16739 394 aa15.94■□□□□ 0.14
TOP3B-215ENST00000470338 POTEDQ86YR6 584 aa15.94■□□□□ 0.14
TOP3B-215ENST00000470338 NME8Q8N427 588 aa15.94■□□□□ 0.14
TOP3B-215ENST00000470338 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
TOP3B-215ENST00000470338 GUCD1Q96NT3 240 aa15.94■□□□□ 0.14
TOP3B-215ENST00000470338 FAM49AQ9H0Q0 323 aaPredicted RBP15.94■□□□□ 0.14
TOP3B-215ENST00000470338 FOXP1Q9H334 677 aaPredicted RBP15.94■□□□□ 0.14
TOP3B-215ENST00000470338 NRBP2Q9NSY0 501 aa15.94■□□□□ 0.14
TOP3B-215ENST00000470338 VAV3Q9UKW4 847 aa15.94■□□□□ 0.14
TOP3B-215ENST00000470338 CDH23Q9H251 3354 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 CHD7Q9P2D1 2997 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 EML1O00423 815 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 C22orf31O95567 290 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 OATP04181 439 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 KCNJ6P48051 423 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 RABGGTBP53611 331 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 IER5Q5VY09 327 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 HERC6Q8IVU3 1022 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 SLFN12Q8IYM2 578 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 KIAA0319LQ8IZA0 1049 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 SEPT8Q92599 483 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 FAM161BQ96MY7 647 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 ZNF576Q9H609 170 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 CEP131Q9UPN4 1083 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 YBX2Q9Y2T7 364 aaKnown RBP15.93■□□□□ 0.14
TOP3B-215ENST00000470338 CDY2AQ9Y6F7 541 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 SQORQ9Y6N5 450 aa15.93■□□□□ 0.14
TOP3B-215ENST00000470338 WNT7AO00755 349 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms