RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 PCDHA7Q9UN72 937 aa11.84□□□□□ -0.51
SMC1A-206ENST00000470241 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 ZBTB42B2RXF5 422 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 CUTAO60888 179 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 SMIM10L2AP0DMW4 78 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 SMIM10L2BP0DMW5 78 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 HOXC8P31273 242 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 CCT6AP40227 531 aaKnown RBP11.83□□□□□ -0.52
SMC1A-206ENST00000470241 PTPN11Q06124 597 aaPredicted RBP11.83□□□□□ -0.52
SMC1A-206ENST00000470241 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 XKR3Q5GH77 459 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 C1orf53Q5VUE5 145 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 HAUS3Q68CZ6 603 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 TRMT1LQ7Z2T5 733 aaKnown RBP11.83□□□□□ -0.52
SMC1A-206ENST00000470241 C7orf31Q8N865 590 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
SMC1A-206ENST00000470241 BBXQ8WY36 941 aaPredicted RBP11.83□□□□□ -0.52
SMC1A-206ENST00000470241 EPSTI1Q96J88 318 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 PNMA5Q96PV4 448 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 SCAND2PQ9GZW5 306 aaPredicted RBP11.83□□□□□ -0.52
SMC1A-206ENST00000470241 GTF2IRD1Q9UHL9 959 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
SMC1A-206ENST00000470241 A0A087WWV3 80 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 TMEM150BA6NC51 233 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 ZBTB39O15060 712 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 HBP1O60381 514 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 DKC1O60832 514 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMC1A-206ENST00000470241 INSRRP14616 1297 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 YWHABP31946 246 aaKnown RBP11.82□□□□□ -0.52
SMC1A-206ENST00000470241 UBA7P41226 1012 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 ME1P48163 572 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 PPFIA1Q13136 1202 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 GRIK4Q16099 956 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 TRIM60Q495X7 471 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 FAM47CQ5HY64 1035 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 HYIQ5T013 277 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 GDF6Q6KF10 455 aaPredicted RBP11.82□□□□□ -0.52
SMC1A-206ENST00000470241 POTEGQ6S5H5 508 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 SHC4Q6S5L8 630 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 ANO5Q75V66 913 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 CABP7Q86V35 215 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 CKAP2LQ8IYA6 745 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 LMBR1Q8WVP7 490 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 SYMPKQ92797 1274 aaKnown RBP11.82□□□□□ -0.52
SMC1A-206ENST00000470241 CTAGE1Q96RT6 745 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 NIFKQ9BYG3 293 aaKnown RBP11.82□□□□□ -0.52
SMC1A-206ENST00000470241 SEZ6LQ9BYH1 1024 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 CCSER1Q9C0I3 900 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 NRBP2Q9NSY0 501 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 SETD4Q9NVD3 440 aa11.82□□□□□ -0.52
SMC1A-206ENST00000470241 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 C17orf102A2RUQ5 167 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 DDX11L8A8MPP1 907 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 SLC26A4O43511 780 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 MUTP22033 750 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 RTP1P59025 263 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 ADAM17P78536 824 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 ZNF200P98182 395 aaPredicted RBP11.81□□□□□ -0.52
SMC1A-206ENST00000470241 TLE2Q04725 743 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 GRB10Q13322 594 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 KARSQ15046 597 aaKnown RBP11.81□□□□□ -0.52
SMC1A-206ENST00000470241 TARBP2Q15633 366 aaKnown RBP11.81□□□□□ -0.52
SMC1A-206ENST00000470241 ZRSR1Q15695 479 aaKnown RBP11.81□□□□□ -0.52
SMC1A-206ENST00000470241 TMEM119Q4V9L6 283 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 ZNF484Q5JVG2 852 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 MARCH8Q5T0T0 291 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 PLA2G4FQ68DD2 849 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 ANKRD33Q7Z3H0 272 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 KCNK18Q7Z418 384 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 FAM126BQ8IXS8 530 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 PIGOQ8TEQ8 1089 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 LRRC15Q8TF66 581 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 TRAPPC12Q8WVT3 735 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 CEP89Q96ST8 783 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 SH2D3AQ9BRG2 576 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 TRPV6Q9H1D0 765 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 TRMT13Q9NUP7 481 aaKnown RBP11.81□□□□□ -0.52
SMC1A-206ENST00000470241 SEPT9Q9UHD8 586 aaPredicted RBP11.81□□□□□ -0.52
SMC1A-206ENST00000470241 KIAA1024Q9UPX6 916 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 MYH15Q9Y2K3 1946 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 NRCAMQ92823 1304 aa11.81□□□□□ -0.52
SMC1A-206ENST00000470241 COL1A2P08123 1366 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 MBLAC1A4D2B0 266 aaPredicted RBP11.8□□□□□ -0.52
SMC1A-206ENST00000470241 RRN3P2A6NIE6 340 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 B4GALT4O60513 344 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 PQBP1O60828 265 aaKnown RBP11.8□□□□□ -0.52
SMC1A-206ENST00000470241 CD4P01730 458 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 XRCC6P12956 609 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMC1A-206ENST00000470241 NPEPPSP55786 919 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 IGBP1P78318 339 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 RESP18Q5W5W9 173 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 ADALQ6DHV7 355 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 ZBTB10Q96DT7 871 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 TOX2Q96NM4 488 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 NACC1Q96RE7 527 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 PLIN2Q99541 437 aa11.8□□□□□ -0.52
SMC1A-206ENST00000470241 CYP26B1Q9NR63 512 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms