RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CPXCR1Q8N123 301 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 GOLM1Q8NBJ4 401 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 KCT2Q8NC54 265 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 OTUD7AQ8TE49 926 aaPredicted RBP5.62□□□□□ -1.51
COL3A1-205ENST00000470167 INTS12Q96CB8 462 aaKnown RBP5.62□□□□□ -1.51
COL3A1-205ENST00000470167 NR1H4Q96RI1 486 aaPredicted RBP5.62□□□□□ -1.51
COL3A1-205ENST00000470167 FNBP1Q96RU3 617 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 HNRNPABQ99729 332 aaKnown RBP5.62□□□□□ -1.51
COL3A1-205ENST00000470167 PUS3Q9BZE2 481 aaKnown RBP5.62□□□□□ -1.51
COL3A1-205ENST00000470167 B3GNT4Q9C0J1 378 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 CSRNP2Q9H175 543 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 NEUROD4Q9HD90 331 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 ST7Q9NRC1 585 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 SEPT11Q9NVA2 429 aaKnown RBP5.62□□□□□ -1.51
COL3A1-205ENST00000470167 MAGED1Q9Y5V3 778 aaPredicted RBP5.62□□□□□ -1.51
COL3A1-205ENST00000470167 SNCAIPQ9Y6H5 919 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 SLC4A4Q9Y6R1 1079 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 USP19O94966 1318 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 CCNB3Q8WWL7 1395 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 TNIKQ9UKE5 1360 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 NLRP1Q9C000 1473 aa5.62□□□□□ -1.51
COL3A1-205ENST00000470167 GOLGA6L7A0A1B0GV03 622 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 FAM177BA6PVY3 158 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 UBAP1LF5GYI3 381 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 BIN1O00499 593 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 NDC80O14777 642 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 SCAMP3O14828 347 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 AXIN1O15169 862 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 NCAM2O15394 837 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 STRNO43815 780 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 IDH3BO43837 385 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 SMNDC1O75940 238 aaKnown RBP eCLIP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 RASGRP1O95267 797 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 ZFYP08048 801 aaPredicted RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CES1P23141 567 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 GRNP28799 593 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 RPL9P32969 192 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 DDIT3P35638 169 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CD86P42081 329 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 GUCY2FP51841 1108 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 PLTPP55058 493 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 TYRO3Q06418 890 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 SULT2A1Q06520 285 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 KLHL30Q0D2K2 578 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 ITGA7Q13683 1181 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 BYSLQ13895 437 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 SSPNQ14714 243 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 INSCQ1MX18 579 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 PLEKHO1Q53GL0 409 aaPredicted RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 TRAPPC3LQ5T215 181 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 MZT2BQ6NZ67 158 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 TATDN1Q6P1N9 297 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 FAM173BQ6P4H8 233 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CCDC62Q6P9F0 684 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 KSR2Q6VAB6 950 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CENPQQ7L2Z9 268 aaPredicted RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 C14orf80Q86SX3 495 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CAND1Q86VP6 1230 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 MCF2L2Q86YR7 1114 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 SCYL3Q8IZE3 742 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CCAR2Q8N163 923 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CMTR1Q8N1G2 835 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 ARRDC4Q8NCT1 418 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 TTC16Q8NEE8 873 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 NPLOC4Q8TAT6 608 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 ZNF653Q96CK0 615 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 ERO1AQ96HE7 468 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CSRNP1Q96S65 589 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 SMC6Q96SB8 1091 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 GAS2L1Q99501 681 aaPredicted RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 TUBA1CQ9BQE3 449 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 CARD11Q9BXL7 1154 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 TRIM5Q9C035 493 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 GLT8D2Q9H1C3 349 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 NCOR1P1Q9H4R4 102 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 C8orf33Q9H7E9 229 aaPredicted RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 XAB2Q9HCS7 855 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 SMYD2Q9NRG4 433 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 ATP8A2Q9NTI2 1148 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 PARP2Q9UGN5 583 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 SH3GLB1Q9Y371 365 aa5.61□□□□□ -1.51
COL3A1-205ENST00000470167 RTCBQ9Y3I0 505 aaKnown RBP5.61□□□□□ -1.51
COL3A1-205ENST00000470167 MYO3BQ8WXR4 1341 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 LOC105371267A0A1B0GV96 52 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 RASSF10A6NK89 507 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 CCDC169A6NNP5 214 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 SOBPA7XYQ1 873 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 B4DLN1 442 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 NRG2O14511 850 aaPredicted RBP5.6□□□□□ -1.51
COL3A1-205ENST00000470167 ST8SIA5O15466 376 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 SULT1B1O43704 296 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 ZBTB14O43829 449 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 DGAT1O75907 488 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 SLC4A1P02730 911 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 ITGB1P05556 798 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 CDK4P11802 303 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 MUTP22033 750 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 ANXA13P27216 316 aa5.6□□□□□ -1.51
COL3A1-205ENST00000470167 MLH1P40692 756 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms